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SCNpilot_expt_1000_bf_scaffold_33880_2

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

partial RP 7 / 55 BSCG 12 / 51 ASCG 4 / 38 MC: 2
Location: comp(419..673)

Top 3 Functional Annotations

Value Algorithm Source
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 72.0
  • Bit_score: 136
  • Evalue 2.30e-29
uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 60.0
  • Bit_score: 66
  • Evalue 6.60e-09
Uroporphyrinogen decarboxylase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XI03_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 64.0
  • Bit_score: 70
  • Evalue 1.10e-09

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 255
ATGGGCGGAGAGGCAGACGAGCACGCGGGTCCAGTCGTGAGTCGAACGGAAGGGAACGAGGTTAGTATAACGATTAACGCCCACTCGAGCCCGTCCCCCGGGAGCATCATCATCGCCTCTGCCACCGCCGCCGCTCATCCCCTGACCGCGCACGGCACCTCCGCCTCACGGCTGGTCCGCGCCCTCCGCGGCGATCGTCTGGAGATCACCCCCGTCTGGTTCATGCGGCAGGCCGGGCGCTCGCTTCCCGAGTAA
PROTEIN sequence
Length: 85
MGGEADEHAGPVVSRTEGNEVSITINAHSSPSPGSIIIASATAAAHPLTAHGTSASRLVRALRGDRLEITPVWFMRQAGRSLPE*