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SCNpilot_expt_1000_bf_scaffold_5895_7

Organism: SCNPILOT_EXPT_750_P_Chlamydiae_37_5_partial

partial RP 37 / 55 MC: 1 BSCG 35 / 51 MC: 6 ASCG 7 / 38 MC: 1
Location: 6231..6851

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Protochlamydia amoebophila (strain UWE25) RepID=RS4_PARUW similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 206.0
  • Bit_score: 349
  • Evalue 3.00e-93
  • rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 206.0
  • Bit_score: 383
  • Evalue 2.00e-103
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 206.0
  • Bit_score: 349
  • Evalue 9.50e-94
  • rbh

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Taxonomy

Neochlamydia sp. EPS4 → Neochlamydia → Chlamydiales → Chlamydiia → Chlamydiae → Bacteria

Sequences

DNA sequence
Length: 621
ATGGCTCGTTATACAGGTAATAAAAACCGAATTGCCCGACGTTTCGGTGCAAATATTTTTGGCCGTACCCGCAATCCATTACTGCATAAACCTAATCCCCCTGGAATGCACGGAGCGCGTCGCCGTAAAAAATCAGACTATGGCCTGCAATTAGAAGAAAAGCAAAAGCTTAAAGCTATTTATGGCATGCTAAGTGAAAAACAACTAGTGACTTATTTTAAAACAGCTTTAAGCAAAGCTGGAAATACTGCTCAGCATTTTGCTGAAATGTTAGAGTGCCGTTTAGACAATATTGTCTATCGTCTAAAATTAGCCCCTACAATTTTCGCAGCGCACCAACTCGTTTCCCATGGCCATATTCTTGTGGATGGTAAAAAAGTAGATCGTCGTTCTTTCCAAGTTCGTCCTGGTATGGTGATTTCTGTTAAAGAAAAATCCCGTAACATGAAAATTATTCAAGAAGCCTTAGATAATCCATCTCGCACAATTCCAGACTACCTCTCTTCTAGTAAAGAGAATTTTGGTGGACAATTGCTCGCGATGCCTACTCATGAACAAATGCCTTGGCCTATTGAAATAAAACTTCATGAGATCTGCGATTTCTTAGCTCACTCAACCTAA
PROTEIN sequence
Length: 207
MARYTGNKNRIARRFGANIFGRTRNPLLHKPNPPGMHGARRRKKSDYGLQLEEKQKLKAIYGMLSEKQLVTYFKTALSKAGNTAQHFAEMLECRLDNIVYRLKLAPTIFAAHQLVSHGHILVDGKKVDRRSFQVRPGMVISVKEKSRNMKIIQEALDNPSRTIPDYLSSSKENFGGQLLAMPTHEQMPWPIEIKLHEICDFLAHST*