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SCNpilot_expt_1000_bf_scaffold_5900_7

Organism: SCNPILOT_EXPT_300_BF_Sphingopyxis_65_7_partial

partial RP 16 / 55 BSCG 13 / 51 ASCG 5 / 38
Location: comp(5575..6114)

Top 3 Functional Annotations

Value Algorithm Source
Flagellar biosynthetic protein FliR n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UV92_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 179.0
  • Bit_score: 335
  • Evalue 3.90e-89
  • rbh
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 179.0
  • Bit_score: 335
  • Evalue 5.50e-89
flagellar biosynthetic protein FliR; K02421 flagellar biosynthetic protein FliR similarity KEGG
DB: KEGG
  • Identity: 81.5
  • Coverage: 178.0
  • Bit_score: 289
  • Evalue 1.00e-75

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
GTGATCGGGCTCGCGATCGGCTTCGTGCTCCAGATGGGGCTCGCCGCCGCGCTGCTCGCGGGCGAGGCGATCAGCAACGCCATGGGCCTCGGCTTCGCGGCAATGGTCGATCCGATGAGCGGGCAGATGAGCTCGGCGGTCGGCCAGTTCCTCTCGATGCTCGCCACCGCGCTGTTCCTGGCGGCGAACGGCCATCTGCTGCTCATCGAGATCATCGTGCAGAGCTATAATGCGCTGCCGCCGGGCAACGCCTTTCCCTCCTATGGCGCGATCGAAGGCATCTTGCGCTTCGGCAGCCTGATGTTCGCGGCGGGGCTGACCATCGCCCTGCCCGTCGGCTTCGTGCTGATCATGGTCCAGATGGTGATGGGCGTCATCGGGCGCTCGGCTCCGGCGATGAACCTGTTCGCGGTCGGCCTGCCGGCGACGCTGCTTGCCGGGGTCATCCTCCTCGGCATCGCGACCCCCGCGATGGCCGAGGCGATCGCCCGCTTCCTGTCCGATGCGCTCGACATGGCGCGCCTGCTCGCGGGGGGCTGA
PROTEIN sequence
Length: 180
VIGLAIGFVLQMGLAAALLAGEAISNAMGLGFAAMVDPMSGQMSSAVGQFLSMLATALFLAANGHLLLIEIIVQSYNALPPGNAFPSYGAIEGILRFGSLMFAAGLTIALPVGFVLIMVQMVMGVIGRSAPAMNLFAVGLPATLLAGVILLGIATPAMAEAIARFLSDALDMARLLAGG*