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SCNpilot_expt_1000_bf_scaffold_8296_9

Organism: SCNPILOT_EXPT_300_BF_Sphingopyxis_65_7_partial

partial RP 16 / 55 BSCG 13 / 51 ASCG 5 / 38
Location: comp(5594..5857)

Top 3 Functional Annotations

Value Algorithm Source
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 52.0
  • Bit_score: 109
  • Evalue 2.40e-21
glutamate racemase; K01776 glutamate racemase [EC:5.1.1.3] similarity KEGG
DB: KEGG
  • Identity: 90.2
  • Coverage: 51.0
  • Bit_score: 99
  • Evalue 7.30e-19
Glutamate racemase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WCS8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 52.0
  • Bit_score: 109
  • Evalue 1.70e-21

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 264
ATGCAGACTCCCGCGCCCGACGCGCCCATTCTCTTTTTCGACAGCGGCCTTGGCGGACTGACCGTCCTCGGACCGACGCGCGCGCTGCTGCCGACAGCACCGATCGTCTATGCCGCCGACTATGCCGGCCTGCCCTATGGCAAGAAAAGCGACGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGGGCGACTGGTCGAACGCTACCACCCCCGGCTCGCCGTCATCGCCGGCAACACGGCATCGACCATCGCGCTAG
PROTEIN sequence
Length: 88
MQTPAPDAPILFFDSGLGGLTVLGPTRALLPTAPIVYAADYAGLPYGKKSDAXXXXXXXXXXXSGDWSNATTPGSPSSPATRHRPSR*