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SCNpilot_expt_1000_bf_scaffold_8382_6

Organism: SCNPILOT_EXPT_300_BF_Sphingopyxis_65_7_partial

partial RP 16 / 55 BSCG 13 / 51 ASCG 5 / 38
Location: comp(3502..4332)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WF70_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 276.0
  • Bit_score: 551
  • Evalue 5.30e-154
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:ENY82383.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 276.0
  • Bit_score: 551
  • Evalue 7.50e-154
LysR family transcriptional regulator; K03566 LysR family transcriptional regulator, glycine cleavage system transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 276.0
  • Bit_score: 473
  • Evalue 5.80e-131
  • rbh

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 831
ATGACGCAGGCGGCGGTCAGCTATCAGGTCCGCCAATTGGAAGACAGGCTCGGCCGCGCGCTGTTCGTGCGTGAGAAAGGGCGCGTGCGGTTGTCGGAGACCGGGCAACGCGTGTTTCCCGCGATCCGCGCCGCCTTTGCCGCAATGCACGATGCCTTCGCTGCAATTGGCAGCGACGAAACCGACGTGCTGACGATCAGCGCCGTGACGAGCTTCGGCGGCGCGTGGCTGAGCGCGCGTATCGGCCGCTTCCAGCTCGCGTACCCCGACCTTGCCGTGCGCATGTCGATGAGCAACGATCTGGTCGACTTCGACGCGTCGAACGTCGATGTTGCGATCCGCCTTGGAATGGGGCCGTGGCCCGGCCTGCGCAGCGACTTTCTGATGCGCCAGACGCTGGCACCGCTCGCCGCACCATCGTTCATCGCCGAGCATGCGATCCGCGAACCCGCCGATCTGCTGCGCGTCCAGCGGCTCGCCCCGAACGACAGCTGGTGGGCCGACTGGTTTGTCGCCGCGGGGGTCGCGACTCCGCTGGCGCCATCGCGCCTTGGCATCGAGCTCGACAGCCAGTTGCAGGAGGCGAGCGCGGTGCAGGCGGGCTTCGGGGTCGCCATGATGACCCCGCTGTTCTGGCAGGCCGACCTTGCCAGCGGCCGGATGGTCCAGCCCTTCGATACGCTCTATGTCGCCGATGCCGGCCTGTGGCTCGTCCACCGCGAAAATCGCGTCGGGGTGCGCAAGATCGAGCGCTTCCGCGAATGGCTGCACGCCGAATTGAAGAAGGATCGCCACCTGCTGCCCGAGGCGCTATGGCAGCCGCCGTCATGA
PROTEIN sequence
Length: 277
MTQAAVSYQVRQLEDRLGRALFVREKGRVRLSETGQRVFPAIRAAFAAMHDAFAAIGSDETDVLTISAVTSFGGAWLSARIGRFQLAYPDLAVRMSMSNDLVDFDASNVDVAIRLGMGPWPGLRSDFLMRQTLAPLAAPSFIAEHAIREPADLLRVQRLAPNDSWWADWFVAAGVATPLAPSRLGIELDSQLQEASAVQAGFGVAMMTPLFWQADLASGRMVQPFDTLYVADAGLWLVHRENRVGVRKIERFREWLHAELKKDRHLLPEALWQPPS*