ggKbase home page

SCNpilot_expt_1000_bf_scaffold_22113_3

Organism: SCNPILOT_EXPT_300_BF_Sphingopyxis_65_7_partial

partial RP 16 / 55 BSCG 13 / 51 ASCG 5 / 38
Location: comp(1801..1926)

Top 3 Functional Annotations

Value Algorithm Source
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 41.0
  • Bit_score: 79
  • Evalue 1.30e-12
triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 40.0
  • Bit_score: 66
  • Evalue 2.50e-09
Triosephosphate isomerase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2A3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 41.0
  • Bit_score: 79
  • Evalue 9.00e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 126
GTCAACGGCGACAATGCCGCCGAACTGCTTGGCGCGGGCGATGTCGATGGCGCGCTCGTCGGCGGGGCGAGCCTGACCGCGGAAAAGTTCCTGCCGATCGTCGCGGCGGCGGCGACCCTCGGCTGA
PROTEIN sequence
Length: 42
VNGDNAAELLGAGDVDGALVGGASLTAEKFLPIVAAAATLG*