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SCNpilot_expt_1000_bf_scaffold_24997_1

Organism: SCNPILOT_EXPT_300_BF_Sphingopyxis_65_7_partial

partial RP 16 / 55 BSCG 13 / 51 ASCG 5 / 38
Location: 3..275

Top 3 Functional Annotations

Value Algorithm Source
sodium:melibiose symporter n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00037C0324 similarity UNIREF
DB: UNIREF100
  • Identity: 44.6
  • Coverage: 83.0
  • Bit_score: 91
  • Evalue 5.00e-16
Na+/melibiose symporter-like protein similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 89.0
  • Bit_score: 89
  • Evalue 4.60e-16
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.8
  • Coverage: 84.0
  • Bit_score: 95
  • Evalue 3.70e-17

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Taxonomy

R_Sphingopyxis_65_24 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
TTTGCCGGTAATTTCTTCATGCAGAAATGCGCGACCGGCCTCGGCATCTTCATCACCGGGATGCTGGTCGATCTGGCGGGCATCCCCGAAAAGGCCGACCCCGCCAAGGTGCCTGAATCGGTGATCGACAATTTTTCGCTCTATTATTGCGTACTGGTGATCCTGTTCGCGATCCTGTCGTCGCTGATCTTCCGCCATTATCCGATCAATCGCGAAGATCATGAGGCACGGGTGGCCGCGCTTGCGGTCGCGCCGATCGACGACCCGCGATGA
PROTEIN sequence
Length: 91
FAGNFFMQKCATGLGIFITGMLVDLAGIPEKADPAKVPESVIDNFSLYYCVLVILFAILSSLIFRHYPINREDHEARVAALAVAPIDDPR*