ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_expt_1000_bf_scaffold_21922_2

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

partial RP 6 / 55 BSCG 6 / 51 ASCG 4 / 38
Location: 468..1769

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036E5E9F similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 433.0
  • Bit_score: 573
  • Evalue 1.60e-160
Hemolysins and related proteins containing CBS domains {ECO:0000313|EMBL:GAD23229.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 433.0
  • Bit_score: 573
  • Evalue 2.20e-160
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 427.0
  • Bit_score: 569
  • Evalue 9.30e-160

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidovorax sp. MR-S7 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1302
ATGAACCTGACCCAAAGCCTGCTGCTCATCGCCCTGTTGATCGTGGTCAGCGCCTTTTTCTCGCTGGCCGAGATCGCGCTGGCCGCCTCGCGGCGCCTGCGCCTGCGCCAGCTGGCCGACGACGGGGACGCCCGCGCGCTGCGCGTGCTGCGGGCGCAGGAGCAGCCAGGCTTTTATTTCACCACCGTGCAGATCGGCCTGAACGCCGTCGCCATCCTGGGCGGCATCGTCGGCGAAGGTCTGCTGGGCCCCTACCTGGCCGAGGCGCTGCGGCCGTGGCTGCCCGAGCGCACGGCCGCCAGCCTGTCGCTGGTCGGTTCGGTGGCGGCGGTGACCTCGGTGTTCGTGGTGTTCGCCGATCTGGTGCCCAAGCGCCTGGGCATGGCCGAGCCCGAGCGCGTGGCCATGGCCGTGGTCGGGCCGATGGCGCACGTGCTGCTGCTGTTCAAGCCCATCGTCTGGCTGTACACCCGCTGCACCGACCTGGTGATGCGCCTGCTGGGCCTGCCCATGCAGCGCGACGAGCGCATCACGCCGGACGACATCCTGGCGCTGGCCGAGGCCGGCACCCAGGCCGGAGTGCTGGATCGGCCCGAGCAGCAGGTGATCGAGAACGTGTTCGGGCTGGACACGCGCACCGTCACCAGCGCCATGACGCCGCGCGACCGCATTGCCTGGCTGCGCCACGACGCCGGCGACGCCGAGGTGCGCCTGCGCATCGCCGCCGAGCCGTTTTCGACCTACCCGGTGTGCGAGGGCGAGCTCGACCGGGTGCTGGGCTACGTGGACGCCAAGGACCTGTTCCAGCGCGTGCTCAACCAGCGCACGATCGACCTGACCGAGCCGCACCTGTTGCACAAGGTGGTGGTGGTGCCCGACAGCCTGAGCCTGTCGGAGGTGCTGCACCAGTTCCGCCAGCAGCACGAGGACTTCGCGCTGATCGTCAACGAATACAGCACCGTCGTCGGCGTGGTCACGCTCAACGACGTGATGAGCACGGTGATGGGCGAGCTGGTCACGCCCGAGGACGAGGAGCCGATCGTGCTGCGCGACGACGGCTCCTGGCTGATCGACGGCCACACGCCGATGGCCGACGTGCAGCGCGCGCTGAACCTGGACGATCTGCCCAGCGCCGAGGCCTACGACACGCTGGCCGGCTTTCTGATGGTGATGCTGCGCCGCGTGCCGCGTCGCACCGACAGCGTGCTGTGGGGCGGCCACCGCTTCGAGGTGATGGACGTGGACAACTACCGGATCGACCAGGTGCTGGTCACGCGCAGCGACCCCGCGTCGTCCAGTTAA
PROTEIN sequence
Length: 434
MNLTQSLLLIALLIVVSAFFSLAEIALAASRRLRLRQLADDGDARALRVLRAQEQPGFYFTTVQIGLNAVAILGGIVGEGLLGPYLAEALRPWLPERTAASLSLVGSVAAVTSVFVVFADLVPKRLGMAEPERVAMAVVGPMAHVLLLFKPIVWLYTRCTDLVMRLLGLPMQRDERITPDDILALAEAGTQAGVLDRPEQQVIENVFGLDTRTVTSAMTPRDRIAWLRHDAGDAEVRLRIAAEPFSTYPVCEGELDRVLGYVDAKDLFQRVLNQRTIDLTEPHLLHKVVVVPDSLSLSEVLHQFRQQHEDFALIVNEYSTVVGVVTLNDVMSTVMGELVTPEDEEPIVLRDDGSWLIDGHTPMADVQRALNLDDLPSAEAYDTLAGFLMVMLRRVPRRTDSVLWGGHRFEVMDVDNYRIDQVLVTRSDPASSS*