ggKbase home page

SCNpilot_expt_1000_bf_scaffold_38866_3

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 6 / 55 BSCG 8 / 51 ASCG 4 / 38
Location: 889..1200

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase,Response regulator receiver domain protein,histidine kinase n=1 Tax=Novosphingobium sp. AP12 RepID=J2PNR0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 97.0
  • Bit_score: 169
  • Evalue 2.10e-39
Histidine kinase,Response regulator receiver domain protein,histidine kinase {ECO:0000313|EMBL:EJL29247.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 97.0
  • Bit_score: 169
  • Evalue 3.00e-39
response regulator receiver sensor signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 104.0
  • Bit_score: 165
  • Evalue 1.30e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. AP12 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGAAAGCGGTTATGGAGCAGGTCCACTTTCTCCTGGTCGACGATCTGGAGGGCAATCTCCTGTCGCTGGAGGCGCTGCTGCGGCGCGACGGCCTCGTCGTGCTGAAGGCGCGGTCGGGCGAGGAGGCGCTGGAGCTGCTGCTGCGCCACGACGTCGCGCTGGCGCTGCTCGACGTGCAGATGCCGGGGATGGACGGGTTCGAGCTGGCGGAGTTCATGCGCGGCAACGAGCGCACGCGCCATATCCCGATCATCTTCGTGACGGCTGGCAGCGCGGACCGCCAGCGCCGCTTCCGCGGCTATGAGACGGGC
PROTEIN sequence
Length: 104
MKAVMEQVHFLLVDDLEGNLLSLEALLRRDGLVVLKARSGEEALELLLRHDVALALLDVQMPGMDGFELAEFMRGNERTRHIPIIFVTAGSADRQRRFRGYETG