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SCNpilot_expt_1000_bf_scaffold_25477_2

Organism: SCNPILOT_EXPT_750_P_Sphingobacteriia_41_24

partial RP 14 / 55 MC: 1 BSCG 10 / 51 ASCG 6 / 38
Location: comp(866..1657)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 250.0
  • Bit_score: 389
  • Evalue 2.80e-105
tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 247.0
  • Bit_score: 324
  • Evalue 3.20e-86
  • rbh
tRNA pseudouridine synthase A n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MUN7_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 250.0
  • Bit_score: 393
  • Evalue 1.40e-106
  • rbh

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Taxonomy

Sphingobacterium sp. ML3W → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 792
ATGCTCATTTGGAAAAACGTACCTTTGTTGCATATAATGGATAAAAGACGTTTTTTTTTAGAAATAGCCTATTTTGGACAGGCTTATCATGGTTGGCAAATTCAGAATAATGCAATTTCCGTGCAGGAAGTGCTGAATAAGGCGCTTGAAACCCTGTTGCGGGAACCCATTGAAACAACTGGAGCTGGCCGTACAGATACAGGTGTTCATGCCAAGCAATTGTATGCACATTTCGATGCAGCCCCTGTGGGTATTCTACAAAAAGCTGATCGTTTTATTCATTCGCTCAATGCACTATTGCCCTTTGATGTGGCCGTGAAGCGCCTGATCGAAGTGGAATCCGAAGCACATGCTCGCTTCGATGCGACACAAAGATCCTATGAATACCATCTTCATTTTCATAAAGATCCTTTTATCTATCCCTATTCATGTTTTATGCGCGATCGTCCGGATGTTGAAAAGATGAATGAAGCTGCACAATTTTTATTGGGTAAACAAGATTTCGAATGCTTTAGTAAGTCTCATACGCAGGTGTTTACAAATATTTGCGATATTCGTAGAGCCGAGTGGGTATGGCATACCGAACAACATTTGGTCTTTCATATTACCGCTGATCGCTTTTTGCGCAATATGGTCCGTGCTATTGTGGGTACATCGTTGGAAATAGGCATAAAAGGTAAACCTGTTTCATTTATGCAAGAGGTTATCCAAAGCAAAAACCGGGGGAAGGCAGGTGTTTCCGTGCCGGCACATGGGTTGTATTTAACAGAAGTAGCATATCCTTATATATAG
PROTEIN sequence
Length: 264
MLIWKNVPLLHIMDKRRFFLEIAYFGQAYHGWQIQNNAISVQEVLNKALETLLREPIETTGAGRTDTGVHAKQLYAHFDAAPVGILQKADRFIHSLNALLPFDVAVKRLIEVESEAHARFDATQRSYEYHLHFHKDPFIYPYSCFMRDRPDVEKMNEAAQFLLGKQDFECFSKSHTQVFTNICDIRRAEWVWHTEQHLVFHITADRFLRNMVRAIVGTSLEIGIKGKPVSFMQEVIQSKNRGKAGVSVPAHGLYLTEVAYPYI*