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SCNpilot_expt_1000_bf_scaffold_28296_1

Organism: SCNPILOT_EXPT_750_P_Sphingobacteriia_41_24

partial RP 14 / 55 MC: 1 BSCG 10 / 51 ASCG 6 / 38
Location: 2..475

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2IZ27_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 157.0
  • Bit_score: 212
  • Evalue 3.40e-52
Uncharacterized protein {ECO:0000313|EMBL:ERJ57954.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 157.0
  • Bit_score: 212
  • Evalue 4.70e-52
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 156.0
  • Bit_score: 127
  • Evalue 4.50e-27

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Taxonomy

Sphingobacterium paucimobilis → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 474
AAACAGATCTATCAATATGTTTACCCCAAAACTAAAAATACAGAAGCAACGGAAGACATCCTACATGACCTATTCTTGAGCATCTGGAAAAATCGAAGTAGATTGCAAGAAATCAATAATATCGAATCCTACCTCAAAACTGGCGCACGCTACCTCACCTTCTCTTACTTCAATAAAAATAGCGACCATCATAGGGTGGATATCGATAAAGTAGATATCATCCTCGATGATGCGCCAATCGAAGATCGCTTACATTACCGCTATCTATTGGACCTCATTCAAGAAGAAATACAAAATCTTCCTGAACGTTGCCGAGTTATTTTCAATGAAAGCCGCATCAACCACAAATCCATCAACCAGATAGCCCTAGAATACGGCCTATCAAAAAGTACTGTTGAGAATCAAATAAACAAAGCGCTCAAACGTTTACGCCTAGTTACCAAAGACTTCCACACCTTTCTCTCATTTTTTTAA
PROTEIN sequence
Length: 158
KQIYQYVYPKTKNTEATEDILHDLFLSIWKNRSRLQEINNIESYLKTGARYLTFSYFNKNSDHHRVDIDKVDIILDDAPIEDRLHYRYLLDLIQEEIQNLPERCRVIFNESRINHKSINQIALEYGLSKSTVENQINKALKRLRLVTKDFHTFLSFF*