ggKbase home page

SCNpilot_expt_1000_bf_scaffold_34879_1

Organism: SCNPILOT_EXPT_750_P_Sphingobacteriia_41_24

partial RP 14 / 55 MC: 1 BSCG 10 / 51 ASCG 6 / 38
Location: 2..454

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HCP3_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 82.0
  • Coverage: 100.0
  • Bit_score: 165
  • Evalue 3.40e-38
Transcriptional regulator {ECO:0000313|EMBL:ERJ59516.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 100.0
  • Bit_score: 165
  • Evalue 4.80e-38
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 98.0
  • Bit_score: 144
  • Evalue 3.40e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobacterium paucimobilis → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 453
CTTTGCCGAAGCAAAAGGCCTGGGTATACTGGAAATCTGCCTGGGTTTGATTGGTATATGCTTCCCGGACAACGGCTTATTATTGTGGGGATTAGGATTTGGTGTGCTACACATCATCTATGGTTTTATCGTTTACAAAAAGTACGAATCGTGAAATTAGATCTTTCCTTATATGACAAAATATTTGAAAACAGAGTTCGCCTCCAAATTATGAGTGTTCTCGCTGCCAATGAAGAATATGATTTTAATTCATTGAAAGAATTGTTGGATGTAACCGACGGTAACCTTGCTTCCAACCTAAAAACATTGGAAAAAGAGGAATACATTAGTGTCGAAAAAAGCTTTGTAGACCGGAAGCCGAACACCCGATACAAAAGAACGACAAAAGGACTTAAAGCCTTTGAAAATCACCTTATTGCACTTGAAAATTTAATAAAGCAACAATACAAATAA
PROTEIN sequence
Length: 151
LCRSKRPGYTGNLPGFDWYMLPGQRLIIVGIRIWCATHHLWFYRLQKVRIVKLDLSLYDKIFENRVRLQIMSVLAANEEYDFNSLKELLDVTDGNLASNLKTLEKEEYISVEKSFVDRKPNTRYKRTTKGLKAFENHLIALENLIKQQYK*