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SCNpilot_expt_1000_bf_scaffold_24783_2

Organism: SCNPILOT_EXPT_750_P_Flavobacteriia_40_20

partial RP 15 / 55 MC: 1 BSCG 14 / 51 ASCG 4 / 38
Location: comp(223..1494)

Top 3 Functional Annotations

Value Algorithm Source
Putative lipopolysaccharide biosynthesis protein WzxE n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6H0R3_FLAPJ similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 417.0
  • Bit_score: 491
  • Evalue 7.70e-136
  • rbh
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:KIC00164.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 422.0
  • Bit_score: 519
  • Evalue 3.70e-144
wzxE; lipopolysaccharide biosynthesis protein WzxE; K03328 polysaccharide transporter, PST family similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 417.0
  • Bit_score: 491
  • Evalue 2.40e-136
  • rbh

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Taxonomy

Flavobacterium sp. KMS → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1272
TTGCGGTATAACAAAGAAATATTGAAGTCCACCTTGTTTAAAGTAACCTCTTTAAACAGCATCAGCGTATTATTGAAAATAGGCATAGGACTGATTACTTCAAAAATTATTGCTGTTTTCGTAGGCCCGAACGGCATGGCGCTCGTGGGGAATCTCCGGAACTTCCTGTCGTCAATAGAAACGGTTGCTACCCTTGGATTTCAAAACGGAACGGTAAAATATGTAGCCGAAAATAAAGCGGATAATGAGGCGCTGAAAAAGATCATTTCAACGGTTTTTATAACCTTGGTGTTTACCGCATTGGCAATCAGCTTACTCTTGTTTTTCGGAGCAGATTACTGGAATACCCGTTTGTTTGGAAGCAGTTTTCAATATAAAGCCATTTTTAAGGTTCTGGCATTGGCCTTGCCCTGGTATATAGTGAATGTATTGCTGGTTTCGATCATTAATGGTCTGGGGCAGTTTAAACGGGTGATTTATATCGCAATATTCGGAAACCTGATCGGATTGCTGTTATCTGTAGTGCTGATCAGCCAGTTCCGGACTTTCGGGGCTTTATTGTCGGTTGTGCTCACACCGTCTTTACTGTTTTTCGTTTCGTTTTATTACATCAATAAAGAATATGCGTTTCTGAAAAATATAACTTACCGGTCATTTGATTCCGGAGTTATCCGGTTAATGTCGTCTTATACTTTAATGACATTGGTTTCGGGCTTTGCCGGACCTTTGGTGTATCTGGCAATACGGAATAATGTTATTGAAACGATTGGGATCAAAGAAGCCGGATATTGGGAAGCAATAAGCCGGATATCGTCCTATTATTTAATGTTTATCGGGACTTTATTGTCGGTGTATTTCTTGCCGAAACTGGTTGAAGCACAAAATAATACCGAAACGAAAAAAGTGTTTTGGAGCTATTATAAAACCATTATGCCGTTGTTTGGTTTAGGACTGTTACTGGTTTACGGGTTAAAGGATTTTCTGATTACCCTGCTGTTTACAGCTGATTTTAAACCGGTTTCCGCATTGTTTTTCTGGCAATTAGCCGGTGACTTTTTTAAAGGTGCTTCGCTCATCCTGGGTATGCAGTTTTTTGCAAAAAAGCTCACCAGGGATTTTATTATTACCGAGATTACCTCACTGCTGATTCTTTATATCGCCAGCATTTACTGTATCAACGCTTTTGGCATCAAAGGAGTGGTTATAGGGCATACGATAACGTATTTTGTTTATTTATGTGTTTTGGGTGTTTATTTTAGGAATAAACGCTAA
PROTEIN sequence
Length: 424
LRYNKEILKSTLFKVTSLNSISVLLKIGIGLITSKIIAVFVGPNGMALVGNLRNFLSSIETVATLGFQNGTVKYVAENKADNEALKKIISTVFITLVFTALAISLLLFFGADYWNTRLFGSSFQYKAIFKVLALALPWYIVNVLLVSIINGLGQFKRVIYIAIFGNLIGLLLSVVLISQFRTFGALLSVVLTPSLLFFVSFYYINKEYAFLKNITYRSFDSGVIRLMSSYTLMTLVSGFAGPLVYLAIRNNVIETIGIKEAGYWEAISRISSYYLMFIGTLLSVYFLPKLVEAQNNTETKKVFWSYYKTIMPLFGLGLLLVYGLKDFLITLLFTADFKPVSALFFWQLAGDFFKGASLILGMQFFAKKLTRDFIITEITSLLILYIASIYCINAFGIKGVVIGHTITYFVYLCVLGVYFRNKR*