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SCNpilot_expt_1000_bf_scaffold_29689_4

Organism: SCNPILOT_EXPT_750_P_Flavobacteriia_40_20

partial RP 15 / 55 MC: 1 BSCG 14 / 51 ASCG 4 / 38
Location: comp(1498..1998)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SQZ4_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 130.0
  • Bit_score: 237
  • Evalue 1.30e-59
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 141.0
  • Bit_score: 238
  • Evalue 6.50e-60
greA; transcription elongation factor GreA; K03624 transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 130.0
  • Bit_score: 226
  • Evalue 5.70e-57

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Taxonomy

Flavobacterium sp. EM1308 → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 501
TTAAAAATTGAAATAAATAAAAAACAATATCTTTGTAGAAATAAATCCCGTTTCGATGGGATTTTTTCTATTTATATAAACGACGAAATTATGAGTAAAGTATCTTATTATACGGCTGAAGGATTGAAAAAATTAAGAGATGAGTTGGATCAGTTAAAAAGCATCGAACGTCCTCGTGCATCGCAGGCAATTGCAGAAGCAAGGGACAAAGGTGACTTATCTGAAAATGCAGAATATGATGCGGCTAAAGAAGCTCAGGGACTTTTGGAACTTAAAATTTCTAAAATGGAAGACGTAGTTGCCAATGCCCGTTTAATTGATGAATCGCAATTGGATGTATCAAAAGTATTGGTACTGTCTACTGTTAAAATAAAAAATCAAACCAACGGAATGGAATTGAAATATACGTTGGTGGCAGAAAGTGAAGCCGATTTAAAAACCGGAAAAATCTCCGTTACCTCACCAATTGGTAAAGGATTGNNNNNNNNNNNNNNTAGGTGA
PROTEIN sequence
Length: 167
LKIEINKKQYLCRNKSRFDGIFSIYINDEIMSKVSYYTAEGLKKLRDELDQLKSIERPRASQAIAEARDKGDLSENAEYDAAKEAQGLLELKISKMEDVVANARLIDESQLDVSKVLVLSTVKIKNQTNGMELKYTLVAESEADLKTGKISVTSPIGKGLXXXXXR*