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SCNpilot_expt_1000_bf_scaffold_44400_2

Organism: SCNPILOT_EXPT_750_P_Flavobacteriia_40_20

partial RP 15 / 55 MC: 1 BSCG 14 / 51 ASCG 4 / 38
Location: comp(438..734)

Top 3 Functional Annotations

Value Algorithm Source
HupA protein n=4 Tax=Flavobacterium RepID=V6RZS6_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 96.0
  • Bit_score: 188
  • Evalue 2.50e-45
DNA-binding protein {ECO:0000313|EMBL:KGO79419.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 98.0
  • Bit_score: 190
  • Evalue 1.60e-45
hupA; histone-like DNA-binding protein HU-alpha; K03530 DNA-binding protein HU-beta similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 95.0
  • Bit_score: 180
  • Evalue 3.60e-43

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Taxonomy

Flavobacterium beibuense → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 297
ATGACGAAAGCAGACATCGTAGCGAAAATTTCCGAAAAATTGGGTCTAGAAAAAGGAGATGTACAAGCAACAGTTGAGTCTTTTATGGACGAAGTAAAAAACTCATTAGAAACTGGTGACAATGTATACTTAAGAGGTTTTGGTAGCTTTATCATCAAAACAAGAGCAGAAAAAACAGGTAGAAATATCTCTAAAAACACTACAATAAAGATTCCTGCCCACAACATTCCAGCTTTCAAACCAGCAAAAATTTTTGTTGATGGCGTGAAAACGAATACTGAAGTAAAAGTTAACTAA
PROTEIN sequence
Length: 99
MTKADIVAKISEKLGLEKGDVQATVESFMDEVKNSLETGDNVYLRGFGSFIIKTRAEKTGRNISKNTTIKIPAHNIPAFKPAKIFVDGVKTNTEVKVN*