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SCNpilot_expt_1000_bf_scaffold_21487_5

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

partial RP 10 / 55 BSCG 9 / 51 ASCG 2 / 38
Location: 1766..2278

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L10 n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EB37_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 171.0
  • Bit_score: 271
  • Evalue 6.60e-70
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 171.0
  • Bit_score: 273
  • Evalue 2.40e-70
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 171.0
  • Bit_score: 270
  • Evalue 2.70e-70

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Taxonomy

Novosphingobium malaysiense → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGGATCGTTCGCAAAAAGCCGACGCGGTTGCCCAGCTCAACGCGACTTTCAACGAGGTCGGCGTGGTGGTTGTCACCCGCAACCTCGGCCTGTCGGTGGCCCAGTCCACCGCACTGCGCGCGAAGATGCGTGAAGCTGGCGGCTCGTACAAGGTTGCGAAGAACCGTCTTGCCAAGCTTGCCATCAAGGACACGGATTACGCCGGTCTCGATCTTCTGTCGGGCCCGACGGCGCTGGCGACTTCGGTCGACCCGGTTGCCGCCGCAAAGGCAGTCGTGGACTTTGCCAAGACGAACCCGAAGCTCGAAATCGTGGGTGGTTCCATGGGCAATACGCTTCTCGACGAAGCCGGTGTCAGGGCGCTCGCGTCCCTGCCGTCGCTCGACGAGCTGCGGGCAAAGCTTGTTGGCCTCGTTCAGGCTCCGGCGACCAAGATCGCTCAGCTCTCCACCGCTCCGGCGGCGAAGCTGGCGCGCGTCTTCGGCGCCTATGCCGCGAAGGATGCCGCGTAA
PROTEIN sequence
Length: 171
MDRSQKADAVAQLNATFNEVGVVVVTRNLGLSVAQSTALRAKMREAGGSYKVAKNRLAKLAIKDTDYAGLDLLSGPTALATSVDPVAAAKAVVDFAKTNPKLEIVGGSMGNTLLDEAGVRALASLPSLDELRAKLVGLVQAPATKIAQLSTAPAAKLARVFGAYAAKDAA*