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SCNpilot_expt_1000_bf_scaffold_23320_1

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

partial RP 10 / 55 BSCG 9 / 51 ASCG 2 / 38
Location: comp(2..940)

Top 3 Functional Annotations

Value Algorithm Source
diguanylate cyclase, partial n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036605F1 similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 281.0
  • Bit_score: 228
  • Evalue 6.90e-57
Uncharacterized protein {ECO:0000313|EMBL:AHY57743.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.3
  • Coverage: 289.0
  • Bit_score: 241
  • Evalue 1.40e-60
putative GGDEF signaling/response regulator protein similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 318.0
  • Bit_score: 222
  • Evalue 2.00e-55

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGCCCGTTTCCCCGGATCGAAGTCTTGCCATACCGGCCGCCGATCTTGAATGGCGCGGGATCGGAATCCCTGTTGTCATTGCCTTGTTTCTGGCGGCCTATGCAGTGGTGGTTTTCAGTGCAGGGCCCCACGCCAAGGCGGCCTCCTATCTTTTTCTGATCGCAGCACCCCTTATGGCTGCGGGGATGTGCCTGTGGCGCATTCATCGCTGGAAGGAGCGGCGGGGATGGGCTGAACTGACGCTCGCCATGCTGCTTTGGGCAGGTGGGATGGCCAGCAACATGGCGATCGACCTTCTGCAACCGCGCTTAGGCGACGTGCCTGGCATCAGTATGGTGCTCTATGTGCTTTACGGCGTGCCCCTGATTTTTGCCGTAGCGAGCCCGGTTGAAGAGCGATTCTCCATCCGGGCAATCGATGCCGCTTTGGCCTTGGTGCTGGGGGGCTTGTTCTGGATTCACATTTTCAGCTTCGCTTCTTTCGATTACGCCAACAAGGAGGGTATTTCCGCAATCCGCTGGCTATTCGATATCGAGAATTCGTTCGTAGCGCTTTTTGCGCTAGCACGATGGCAAGGCTGCCTTGATCCGACGCAGCGGGCCTTCTTCAAAACACTCACCGGTTACGCGACGATTTATCTGTTGGTCGCGGCTTTCATCAATCATTGGATCTCGGACATTGATTTCGGCACGCCTTATGATCTGGTCATCGGCGTGCCTTTCCTTTGGCTCGTGCACGCAATCAGCCGGCATCCTGTGGACCCTGAGGCGTCGTTGCGGCCGCCTTCGGATAGTTTTGCCCTGGCGATACGTGCCGGAAGCCCATTGATGCTGCCGGCGACATTGCTGGCTGTGTCGACCACCCTGCTGTTCGAGGCACCGGCATTCGCTGCGCTGGGCTTCGTCGTGGCGACGTTGGGGTATGGCTTGCGGACCATC
PROTEIN sequence
Length: 313
MPVSPDRSLAIPAADLEWRGIGIPVVIALFLAAYAVVVFSAGPHAKAASYLFLIAAPLMAAGMCLWRIHRWKERRGWAELTLAMLLWAGGMASNMAIDLLQPRLGDVPGISMVLYVLYGVPLIFAVASPVEERFSIRAIDAALALVLGGLFWIHIFSFASFDYANKEGISAIRWLFDIENSFVALFALARWQGCLDPTQRAFFKTLTGYATIYLLVAAFINHWISDIDFGTPYDLVIGVPFLWLVHAISRHPVDPEASLRPPSDSFALAIRAGSPLMLPATLLAVSTTLLFEAPAFAALGFVVATLGYGLRTI