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SCNpilot_expt_1000_bf_scaffold_29709_2

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

partial RP 10 / 55 BSCG 9 / 51 ASCG 2 / 38
Location: comp(1001..1471)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein (Fragment) n=1 Tax=Novosphingobium sp. AP12 RepID=J2H6S5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 156.0
  • Bit_score: 214
  • Evalue 8.80e-53
Uncharacterized protein {ECO:0000313|EMBL:EJL31113.1}; Flags: Precursor; Fragment;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 156.0
  • Bit_score: 214
  • Evalue 1.20e-52
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 153.0
  • Bit_score: 189
  • Evalue 9.50e-46

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Taxonomy

Novosphingobium sp. AP12 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
ATGGTTTCGGCGAACTACACTTTCACCAAATCGAAGCTGAAGGTGACGTCGACCGATACCGTGCAGTTCTATGGTGCGGCCTCGACGGTTGCGACCGACTATTTCCGGGACGGCGCACCGCTGACCGGCCAGTCGGATCATATCGTCAACCTGCAGGTCGGCCTTGAGAATGAAGACCGGCTTTCGCAGCAGACCTTCCTGATCACCTATGCGAGCGATCGAGTGGTTAGCCGCGGTCTGAACGGCACTCCGCCGCAACCCGACGTGATCGAGCGGCCGGGCGTCCAGCTCGATTTCGTGGCGCGCGAAGGCTTCAAGCTGCTCGGCACGGATATGGAAGCGAAGTTCGAGGTGCGTAACATCCTCGGCCGCGGGCATGAGGAATATCAGCAATTCGGGGATCGCCGGGTGGACGTGAACACCTATGACGTGGGCACGACTTACGCCCTCTCCCTGTCCGCGACCTTCTGA
PROTEIN sequence
Length: 157
MVSANYTFTKSKLKVTSTDTVQFYGAASTVATDYFRDGAPLTGQSDHIVNLQVGLENEDRLSQQTFLITYASDRVVSRGLNGTPPQPDVIERPGVQLDFVAREGFKLLGTDMEAKFEVRNILGRGHEEYQQFGDRRVDVNTYDVGTTYALSLSATF*