ggKbase home page

SCNpilot_expt_1000_bf_scaffold_42329_1

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

partial RP 10 / 55 BSCG 9 / 51 ASCG 2 / 38
Location: comp(1..1098)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B43D0C similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 366.0
  • Bit_score: 539
  • Evalue 3.60e-150
TonB-dependent receptor-like protein similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 366.0
  • Bit_score: 524
  • Evalue 2.20e-146
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK67434.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 366.0
  • Bit_score: 524
  • Evalue 9.90e-146

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1098
GGCGGTTCGGTCATTTCGGGCAAGATCGAAGTGATCGAGGGTTATGGGGAAGTGGAAGTTCCCATTCTTGCCGATACGCCCTTCTTTGAAGAACTCAGCGCAAGCGGCGCGGTTCGCCGGACGCATTACAATCGCTCCAGCGATTTCAGCCCATCCTCGTCGCTCAACGTAACCACGTGGAAGCTGGGCGCCGTCTGGGCCCCCATCGAAGCGGTGCGTTTCCGCGTAACCCGCTCGCGCGACGTTCGTGCGCCCAACGTTTCCGAACTGTTCGGACCGACAAGCAACACCACTGGCATTCTGAACGATCCCCAGCGCGATGGCCTGCAGATGGTGGCGCCGATCACTCTGGGCTCCAACCCCAACCTTGTGCCCGAGAAGGCCGACACTCTCACCGTCGGCATGGTCGTGCAGCCCACGGCCGGCTTCTTCAGCCGCTTCCGCGCATCCGTCGACTATTACGATATCGACATCAAGGACGCGATCAGCACGCTGGGTCAGCAGAACATCGTGACCCGTTGTTATCAGGGCGATCCGCTGAGCTGTTCGCTCGTCACGCGCGATGGCAATGGCGTGATTACCAATATCGTGGACACCTTCCAGAACGTGAACGAACTGATCGCTCGCGGCGTGGATTTCGAACTCTCCTATCGTCAGCCGATCGGGAGCAATAATGCGCTCACCCTGCGCACCTTTGTAAGCCACGTTCGTGACCTGATTACGGTCGATGCAGTTGGGCCGACGGAACGGGCAGGGCAGACCGGCCTGCGTGGGGGTACTCCTCCCGGCATTCCTGACTGGACGGCCGACGTAAATGCCACGCTCGAGCTGGGTGAAAGGTTGGAGTTCAACACCCACCTGCGCTGGATCAACAAGGGCTTCTACAACGCGGCCTTCATCGGGGCCGAGCAGGAGGGCTATTCGATGTCGCTGCCCAATAGCTCCAGCACCAATGCGATGCCCGGCCGCTTCTATGTGGACCTTCTGGCAACCTACAAGCTGCCCATCGGCGGCGATGGCAATGCCAGTGTCTATTTCGGAGCGGACAACGTCTTCAATGTCGATCCGCCGAATTTCCCGGGCGCAAATGGCAGCGGC
PROTEIN sequence
Length: 366
GGSVISGKIEVIEGYGEVEVPILADTPFFEELSASGAVRRTHYNRSSDFSPSSSLNVTTWKLGAVWAPIEAVRFRVTRSRDVRAPNVSELFGPTSNTTGILNDPQRDGLQMVAPITLGSNPNLVPEKADTLTVGMVVQPTAGFFSRFRASVDYYDIDIKDAISTLGQQNIVTRCYQGDPLSCSLVTRDGNGVITNIVDTFQNVNELIARGVDFELSYRQPIGSNNALTLRTFVSHVRDLITVDAVGPTERAGQTGLRGGTPPGIPDWTADVNATLELGERLEFNTHLRWINKGFYNAAFIGAEQEGYSMSLPNSSSTNAMPGRFYVDLLATYKLPIGGDGNASVYFGADNVFNVDPPNFPGANGSG