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SCNpilot_expt_1000_bf_scaffold_45109_5

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

partial RP 10 / 55 BSCG 9 / 51 ASCG 2 / 38
Location: comp(1009..1227)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D5B302 related cluster n=1 Tax=unknown RepID=UPI0003D5B302 similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 72.0
  • Bit_score: 141
  • Evalue 3.40e-31
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 72.0
  • Bit_score: 143
  • Evalue 1.20e-31
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 similarity KEGG
DB: KEGG
  • Identity: 95.8
  • Coverage: 72.0
  • Bit_score: 141
  • Evalue 1.10e-31

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Taxonomy

Novosphingobium malaysiense → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 219
GTGCCGGTTTCGAAGAAGCCTGCCGAAGTCCGTCAGGGTAAGGGCAAGGGTTCGATCGAATATTGGGCAGCTCGCGTTAAGCCGGGCCGCATCCTGTTCGAACTGGACGGCGTTGCCGGCCCGCTCGCTGCGGAGGCTTTCAGCCGCGCCGCGATGAAGCTGCCGATCAAGACCAAGGTCGTTGCCCGTCTCGGCGACACCTCGCACCTGGAGGGCTAA
PROTEIN sequence
Length: 73
VPVSKKPAEVRQGKGKGSIEYWAARVKPGRILFELDGVAGPLAAEAFSRAAMKLPIKTKVVARLGDTSHLEG*