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SCNpilot_expt_1000_bf_scaffold_55712_1

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

partial RP 10 / 55 BSCG 9 / 51 ASCG 2 / 38
Location: comp(1..399)

Top 3 Functional Annotations

Value Algorithm Source
Putative exopolysaccharide biosynthesis protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZRJ7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 133.0
  • Bit_score: 199
  • Evalue 2.50e-48
Chromosome partition protein Smc {ECO:0000313|EMBL:AKH41717.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 133.0
  • Bit_score: 199
  • Evalue 2.70e-48
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 133.0
  • Bit_score: 183
  • Evalue 4.40e-44

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Taxonomy

Altererythrobacter atlanticus → Altererythrobacter → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 399
ATGAACGCCATCGTAGAAGAGATCCGCGCGGCGCTGTGGTCGGTCTGGAACCGGCGATGGCTTGCGCTGGCAGTCGCCTGGGGCCTGTGTGTCGCAGGCTGGCTGGCCGTGGCCATGTTCCCCAATGCCTATGAATCGAAGGCCCGCATCTTCGTGCAGCTGGATGATGTGCTGGCCCAGCAGATCGGTATCGGCACCGGAAGCCGCAAGAAGGATATCGAACGCGTCACCCAGACGCTGACGAGCGCGGTCAATCTGGAAAAGGTCATCCGCTCCACTCGCCTCGGCAGCACGGTGAATACGCCGCGTGAAATGGAAAGCGCGGTGGCAGGGCTGGCCAAGACCATCACGGTGAAAAGCACCGAGGAAAACCTGTTCGAGATTACCGCTGAAAGCGGC
PROTEIN sequence
Length: 133
MNAIVEEIRAALWSVWNRRWLALAVAWGLCVAGWLAVAMFPNAYESKARIFVQLDDVLAQQIGIGTGSRKKDIERVTQTLTSAVNLEKVIRSTRLGSTVNTPREMESAVAGLAKTITVKSTEENLFEITAESG