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SCNpilot_expt_1000_bf_scaffold_55712_2

Organism: SCNpilot_P_inoc_Novosphingobium_63_5

partial RP 10 / 55 BSCG 9 / 51 ASCG 2 / 38
Location: comp(419..721)

Top 3 Functional Annotations

Value Algorithm Source
Putative polysaccharide export outer membrane protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YI72_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 100.0
  • Bit_score: 178
  • Evalue 4.50e-42
Putative polysaccharide export outer membrane protein {ECO:0000313|EMBL:GAD47990.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 100.0
  • Bit_score: 178
  • Evalue 6.30e-42
wza; polysaccharide export outer membrane protein; K01991 polysaccharide export outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 100.0
  • Bit_score: 175
  • Evalue 1.20e-41

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Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
GTGATCGTGAACCAGTTCGCCGGTACTTTCAGCCAGCAGGTCCGCATCGTCGGCGCCACTGAGAAGCCCGCCTCCATCCCCTATCGCGCGAATATGACGCTGCTCGATGCGATGATCGCGGTGGGCGGTCTGTCCGAATTCGCCAGCGGCAACCGCGCCAAGTTGGTCCGCTTTGAGAAGGAGACGGGCAAGCAGCAGGAATATGCCCTGCGCCTGTCCGATCTGCTGAAGAAGGGTGACAGCAAGGCCAATGTCCTGCTGATGCCGGGGGATGTGATCATCATTCCCGAAAGCATGTTCTGA
PROTEIN sequence
Length: 101
VIVNQFAGTFSQQVRIVGATEKPASIPYRANMTLLDAMIAVGGLSEFASGNRAKLVRFEKETGKQQEYALRLSDLLKKGDSKANVLLMPGDVIIIPESMF*