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SCNpilot_expt_1000_bf_scaffold_35711_1

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 2 / 55 BSCG 2 / 51 ASCG 0 / 38
Location: comp(56..403)

Top 3 Functional Annotations

Value Algorithm Source
Succinate dehydrogenase, hydrophobic membrane anchor subunit n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z6C0_AZOL4 similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 110.0
  • Bit_score: 111
  • Evalue 4.50e-22
Succinate dehydrogenase {ECO:0000313|EMBL:KJR66124.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.3
  • Coverage: 110.0
  • Bit_score: 112
  • Evalue 4.90e-22
sdhD; Succinate dehydrogenase, hydrophobic membrane anchor subunit; K00242 succinate dehydrogenase membrane anchor subunit similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 110.0
  • Bit_score: 111
  • Evalue 1.40e-22

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Taxonomy

Azospirillum thiophilum → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 348
GTGGCTTCTAATCCGCATGGAAGTGAACATTGGTGGGCGCAACGTCTCACAGCAATTGCCCTTTTGCCACTAAGTCTTTGGTTCTTGGGGTCGCTTTTAATCAATTCGCCCACTGACTATGCCGCAATTGTTGAGTGGCTTAAATCCCCCTTTACGGCGACAGGAATGATCCTTTTTATAGGGCTTTTGCTTTATCATGGACAACTTGGTGCGCAGGTTGTTTTGGAAGACTATATCCATTGTTCTGCCCTTAGATTGTGCTTGATTTATGGGGTGAAAGCTCTGGCTTTAAGCTTATTTGTTTTCGCCTCTTTATGTGTGATTAAAATTCATTTCCACCCCCTTTAG
PROTEIN sequence
Length: 116
VASNPHGSEHWWAQRLTAIALLPLSLWFLGSLLINSPTDYAAIVEWLKSPFTATGMILFIGLLLYHGQLGAQVVLEDYIHCSALRLCLIYGVKALALSLFVFASLCVIKIHFHPL*