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SCNpilot_expt_1000_bf_scaffold_31467_3

Organism: SCNPILOT_EXPT_300_BF_Alicycliphilus_69_12

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(995..1432)

Top 3 Functional Annotations

Value Algorithm Source
LysR substrate-binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TQV0_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 145.0
  • Bit_score: 294
  • Evalue 8.10e-77
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 145.0
  • Bit_score: 294
  • Evalue 2.50e-77
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEB84986.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 145.0
  • Bit_score: 294
  • Evalue 1.10e-76

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 438
GGCGAGGGCTGCCAGCTGCTGGTGGCCAGCCCCGCGCAGATCGCGCGCCAGGGCATGCCCGGCACGCTGCGGGATCTGGCGCGCATGGACACGCTCGCCATGTCCGCCTCCGAGGGGCGGGCCAGCCTGCGATTGATCGGGCCGGATGGCCGCGAGGAGACGGTGCAGTTCACCCCGCGCTACGTGGCCGACGACCTGCTCACCCTCAAGCACGCGGCGCTCGCGGGCACGGGCCTGTGCTGGCTGCCCGACTACCTGTGCCTCGCGGAGCTGGAGGCCGGGCAGTTCGTGCGCGTGCTGCCCCAGTGGTCGCAGCCCAAGGGCATCGTGCACGCGGTGTTCGCCTCGCGCCGGGGGCTGTCGCCCGCGGTGCGCGGTTTCCTGGACTTCCTGGGCGAGACCATGCCCGGCAACATGCGGGCGGGTATCGATAGATGA
PROTEIN sequence
Length: 146
GEGCQLLVASPAQIARQGMPGTLRDLARMDTLAMSASEGRASLRLIGPDGREETVQFTPRYVADDLLTLKHAALAGTGLCWLPDYLCLAELEAGQFVRVLPQWSQPKGIVHAVFASRRGLSPAVRGFLDFLGETMPGNMRAGIDR*