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SCNpilot_expt_1000_bf_scaffold_56016_2

Organism: SCNPILOT_EXPT_750_P_Actinomycetales_72_13

partial RP 1 / 55 BSCG 1 / 51 ASCG 1 / 38
Location: 971..1345

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 138.0
  • Bit_score: 166
  • Evalue 3.10e-38
Transcription termination factor Rho n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3PBB6_LEIXC similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 138.0
  • Bit_score: 164
  • Evalue 8.30e-38
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 138.0
  • Bit_score: 164
  • Evalue 2.60e-38

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Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 375
GTGCTCATCCCGGTGGCGGGCATCCTCGACGTGCTCGACAACTACGCCTTCGTGCGCACCACCGGCTACCTGCCCGGCCCGACCGACGTCTACGTCTCGCTCGGCCAGGTCAAGAAGTACGGCCTGCGCAAGGGCGACGCGGTGGTCGGCGCGATCCGCCAGCCCCGCGAGGGCGAGCAGCCCGGCCGGCAGAAGTACAACGCCCTCGTCAGGATCGACTCGGTGAACGGCCAGACCTCGGAGCAGTCGCTGGCCCGCACCGAGTTCGCCGCGGCCACGCCGGTCCGCCCGAGCACCCCGCTCGGCCTGCGCGGCCCGGTGTCGGAGCTCGGCGTCGGCGCCCGCGCGCTGGTCATCGGCGGCGGCGGGAAGACC
PROTEIN sequence
Length: 125
VLIPVAGILDVLDNYAFVRTTGYLPGPTDVYVSLGQVKKYGLRKGDAVVGAIRQPREGEQPGRQKYNALVRIDSVNGQTSEQSLARTEFAAATPVRPSTPLGLRGPVSELGVGARALVIGGGGKT