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SCNpilot_cont_750_bf_scaffold_275_20

Organism: SCNpilot_cont_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Location: 17071..17328

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CI16_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 85.0
  • Bit_score: 115
  • Evalue 2.30e-23
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EYR78499.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 85.0
  • Bit_score: 115
  • Evalue 3.30e-23
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 79.0
  • Bit_score: 96
  • Evalue 4.60e-18

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 258
ATGACGAGCAAGCGCAAGAAGGCAGACACCGAGCTTGGTACGAGGATCCTGCGAAACATGGCACGGGTCATGGAGCGCGAGCGGGAAAAACGCGGCCTCAACAAGAAAGAAATGGCCGAGCTGTGCGAAGTGACTTATCCCTTTTATTTTCAAATCCTTGAAGGAATAGCGAACCCCTCTTTGCAGACGATTACCCGCATCAGCATCAACCTCGATGTGCCCCTGCAAGAACTCATGAGCGGGTCCGCGCCTCTTTGA
PROTEIN sequence
Length: 86
MTSKRKKADTELGTRILRNMARVMEREREKRGLNKKEMAELCEVTYPFYFQILEGIANPSLQTITRISINLDVPLQELMSGSAPL*