ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_cont_750_bf_scaffold_926_28

Organism: SCNpilot_cont_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Location: comp(33731..35260)

Top 3 Functional Annotations

Value Algorithm Source
RND efflux system, outer membrane lipoprotein, NodT n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QLN4_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 498.0
  • Bit_score: 716
  • Evalue 1.80e-203
RND efflux system, outer membrane lipoprotein, NodT similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 498.0
  • Bit_score: 716
  • Evalue 5.60e-204
RND efflux system, outer membrane lipoprotein, NodT {ECO:0000313|EMBL:ABE62863.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 498.0
  • Bit_score: 716
  • Evalue 2.50e-203

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1530
ATGGCGGCAACGGGAGCAGCCCGCCTCGCAAACCGGGCGGACGATGGCGTGAGCGCTTCCATGGAAACTCGTCCGGTGAAGCCGTTCGCGCCGCTCTCCGGCGTTGGCTTGCTCCTGCGCTGGCTTGTCTTGGCGGGCGCTGCGGGGGCGCTCGCCGGCTGCATGCTGACAACGGATATTCCCGATCCGGCCCTTGACGTGCCGTCGGCCTACAAGGAGGCCGGTCGCGGCGATACGGCGTCCCTGCCGGAACTGGATTGGTGGCGGAGCTTCAAGTCGCATGAACTGACGGCGCTGATGGAGCAGGCCCAGACCGTCAATCTGGATATTGCGGCAGCGGTGGCAAGGATCGTTCAGGCCGATGCGCAGGCGCGGATCACGGGCGCGGCGTTGTTGCCGACGCTCAATGCCGGCGATCAGGCCAGCCGCTCGAAATCGTCGGGCGTGAGTTCGAGCGGCCTCACCAACAGCGGCCGCGAGATCACCAATTTCTCCTCGTCGCTCAGCGCGAGCTACGAGCTCGATTTCTGGGGCAAGAACCGCGATGCCGCGCTGGCGGCGAAGGAGACCGCGACCGCCAGCCGGTTCGACCGCGACGTCGTCGCGCTGACGACATTGACCACGGTGGCCAATGCCTATTTTCAAGTTCTGGCGGCGCAGGATCGGATCCGCACCGCCAATCGCAACATCGCCAGCGCGCAACGCATCCTCGACGCCATCAAGCAGCGCTTCCGCGCCGGCACCGGGACCGATCTCGACGTTGCCCAGCAGGAAAGCGTGCTCGCCAACCAGCGTGCCGCCGTACCGCCGCTGCGGCAGACATTGGCACAGAACATCATCGCGCTGGCGACGCTGGTGGCGCGGCCGCCGGAAAGCCTGCGCGTTTCCGGCGGCTCGCTCAACGGCATCGCCGTGCCGCGGGTGACGCCGGGACTTCCTTCGGAACTGCTGATCCAGCGTCCCGACATTCGCCGCCAGGAAGCCAGCCTTGCCGCCGCCACGGCAAACATCGGCAGCGCGCGGGCTCAGTTCTTTCCGAGCATTCAGCTCACCGGGCAGGGCGGCTACCAAAGTGCCGCGCTGGTCTCGCTGTTCTCGCCGCATGCGGCTTTCTTCAGTCTCGCGGCCGGATTGACCCAGCCGATTTTCGACGGCGGCGCCATTCAGGGCAACTTCGACCTGACCAAGGCGCGTCAGGACGAGCTCTTGCAAACCTACCGCAAGACGGTGGTGTCGGCGTTCGCCGACGTCGACAACGCGCTGGTGGCCATCAAGCAGACCAGCGAAAAACTCCGCTTGCAGCGCGTGGTCGTGGCGGCGTCGCGACGGGCCTTCGAATTGGCTGAACAGCAGCTCAAGGCGGGAACGGCCGACATCGTAACCGTGCTAAACACGCAATTGACGTTATTTCAGGCTGAGGATTCGCTTTTGCAGGCACAATTGGCTCGCCTGCAGGCCATTGTCGGCCTTTATCAGGCGCTGGGTGGCGGCTGGAAACCAAACGCAACAGGGCCGACCAATGCTCTTTAA
PROTEIN sequence
Length: 510
MAATGAARLANRADDGVSASMETRPVKPFAPLSGVGLLLRWLVLAGAAGALAGCMLTTDIPDPALDVPSAYKEAGRGDTASLPELDWWRSFKSHELTALMEQAQTVNLDIAAAVARIVQADAQARITGAALLPTLNAGDQASRSKSSGVSSSGLTNSGREITNFSSSLSASYELDFWGKNRDAALAAKETATASRFDRDVVALTTLTTVANAYFQVLAAQDRIRTANRNIASAQRILDAIKQRFRAGTGTDLDVAQQESVLANQRAAVPPLRQTLAQNIIALATLVARPPESLRVSGGSLNGIAVPRVTPGLPSELLIQRPDIRRQEASLAAATANIGSARAQFFPSIQLTGQGGYQSAALVSLFSPHAAFFSLAAGLTQPIFDGGAIQGNFDLTKARQDELLQTYRKTVVSAFADVDNALVAIKQTSEKLRLQRVVVAASRRAFELAEQQLKAGTADIVTVLNTQLTLFQAEDSLLQAQLARLQAIVGLYQALGGGWKPNATGPTNAL*