ggKbase home page

SCNpilot_cont_750_bf_scaffold_4390_13

Organism: SCNpilot_cont_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Location: comp(5389..5667)

Top 3 Functional Annotations

Value Algorithm Source
WhiB family transcriptional regulator n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B4161C similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 84.0
  • Bit_score: 65
  • Evalue 3.00e-08
transcription factor WhiB similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 62.0
  • Bit_score: 61
  • Evalue 1.80e-07
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 62.0
  • Bit_score: 61
  • Evalue 7.90e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Intrasporangium calvum → Intrasporangium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 279
ATGGCCACACTCACGATTGCGATCCGGGCCGACGCGATGGACGCGTGGACCGAGCTGCAGCGTGCCCTTACCGACGCCGGGCCGGTTCCCTGCCTGGCCGACCCGGCCGCGTGGACGAGTGACGCCGCCGAGGTTCGCGCCTACGCCGCGAGAGCCTGCCGGCGCTGCCCTGTGCTCGCCGAGTGCGCAACGTTCGCCGAGGCCAACCGGGAGCCGTTCGGTGTCTGGGCCGGGCTCGACCGGGCCAACGGAATCAACGAGAGGAGGAAAACGGCATGA
PROTEIN sequence
Length: 93
MATLTIAIRADAMDAWTELQRALTDAGPVPCLADPAAWTSDAAEVRAYAARACRRCPVLAECATFAEANREPFGVWAGLDRANGINERRKTA*