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SCNpilot_cont_750_bf_scaffold_4010_4

Organism: SCNpilot_cont_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Location: 1876..2430

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor n=3 Tax=Amycolatopsis mediterranei RepID=D8I1D3_AMYMU similarity UNIREF
DB: UNIREF100
  • Identity: 46.1
  • Coverage: 165.0
  • Bit_score: 142
  • Evalue 3.80e-31
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 46.1
  • Coverage: 165.0
  • Bit_score: 142
  • Evalue 1.20e-31
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:AEK43672.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.1
  • Coverage: 165.0
  • Bit_score: 142
  • Evalue 5.40e-31

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Taxonomy

Amycolatopsis mediterranei → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGACGTTCGACGAGTTCGCGGCCTCCGAACTGCCGGCGCTGGCAAGGTACGCCCGGACGTTGACCGGCGACCGCCAGCACGCGCACGACGTCCTCGCGGAAGCCCTGGTGACGGCCCACCTGCGCTGGCACAAGATCGGTGCCATGCAGCATCCGGCGGCCTACGTACGCCGTATCGTGACCACCACCTTCCTCGGGGAGAAGCGACGCTGGTCCACGCGACATGTCGTTCTCACCCCTACCGGCGAACTACCGGAGGCCGCGAGCCCGGACCGCGCCGGGAACGTGGACGACCGTGACGAGCTTCGCAGCCTCCTTGCGTCGCTACCGCGCCAGGTTCGGGCCGCCATCGTGATGCGCTACTACCTCGGCCTCGCGGACCGGGACATCGCCGCGGAGCTGGGGTGCGCCGAGGTGACGGTCCGCTCGTACATCTCGCGCGGCATTGCAACCCTCCAGGTCGCCGGCAGCGGCGGAGCCGATGCAAGTGCCGACGCACGACCCGGCGCATCGTCCGCGAACCGAGCCGCCGTCGAACGGAGAGCTGTTCGATGA
PROTEIN sequence
Length: 185
MTFDEFAASELPALARYARTLTGDRQHAHDVLAEALVTAHLRWHKIGAMQHPAAYVRRIVTTTFLGEKRRWSTRHVVLTPTGELPEAASPDRAGNVDDRDELRSLLASLPRQVRAAIVMRYYLGLADRDIAAELGCAEVTVRSYISRGIATLQVAGSGGADASADARPGASSANRAAVERRAVR*