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SCNpilot_cont_750_bf_scaffold_5814_12

Organism: SCNpilot_cont_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Location: comp(5553..6185)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07SK4_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 61.9
  • Coverage: 181.0
  • Bit_score: 207
  • Evalue 1.10e-50
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 61.9
  • Coverage: 181.0
  • Bit_score: 207
  • Evalue 3.50e-51
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABJ05080.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.9
  • Coverage: 181.0
  • Bit_score: 207
  • Evalue 1.50e-50

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGGTTGCCAAGACTGCCCCCAATTCGACTGCTCTCGTTTCGACCAGCTTTGATCCGGAGATTCCCGCTCCGACCGCCGCCGATTTCATCGACCGCATCGTCGCGCTGCGCCCGGCGCTCCGCCGCCAGGCCGCGTATCTGATCGGTCGCCGCACCGAGATCGGAACGCCTGACGATTTCGTCCAGGACGTCATCGTCACGGCATTGCAGACCGCGCATCGCTACGAAGACGACAATCTGTCGGGGTGGCTGTTTGCGATCCTCCAGGGGCACGTCCGCAATGCGCGTCGCCGCGCCCATGTGCGCACCTCGGTGCCCCTCCCTGGCCCCGGCGATGTGGCGGACGACGATGCCGAGTTCATGGAGTTTCCGGTGGCGGCGACCCAGGAGCAGCCGCTGCATCTCGACGACGTGATAACCGCGCTGCGTACGCTGCCCGCCGCCGATCAGGAGATCATCTGGCTGGCGCGGATGGATGGCCTGTCGCAGGACGCGATTGCCGCGCGACTGAATGTGCCGCTTGGCACCGTTTACTCGCGCCTGTCCCGCGCCACCGCGCGGCTGCGCGCCGCCTGCGAGGCGGAGCCCGTACCGACGAGCGGCCCTCGGCTGTCCCTTGGGCGTGCGGCGTAA
PROTEIN sequence
Length: 211
MVAKTAPNSTALVSTSFDPEIPAPTAADFIDRIVALRPALRRQAAYLIGRRTEIGTPDDFVQDVIVTALQTAHRYEDDNLSGWLFAILQGHVRNARRRAHVRTSVPLPGPGDVADDDAEFMEFPVAATQEQPLHLDDVITALRTLPAADQEIIWLARMDGLSQDAIAARLNVPLGTVYSRLSRATARLRAACEAEPVPTSGPRLSLGRAA*