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SCNpilot_cont_750_bf_scaffold_16988_5

Organism: SCNpilot_cont_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Location: comp(3623..3940)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7P9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 105.0
  • Bit_score: 194
  • Evalue 6.30e-47
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 105.0
  • Bit_score: 194
  • Evalue 8.90e-47
rpoH; RNA polymerase factor sigma-32; K03089 RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 105.0
  • Bit_score: 191
  • Evalue 1.70e-46

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 318
GAGCCCGGCGAATGGCAGGACTGGCTGGTCGATACCTCGCCCAACCAGGAAGCCATCATGGCGGAGAGCGAGGAATACGATCACCGCCGCCAGGCCCTGAACGGCGCGATGGGCGTGCTCAACCCGCGCGAGAAGCGCATCTTCGAGGCGCGGCGTCTGGCCGACGAGCCGATGACGCTGGAAGACCTCGCGAGCGAGTTCGGCGTGTCGCGCGAGCGTGTGCGCCAGATCGAGGTGCGCGCGTTCGAAAAGGTGCAGGCCGCGGTGAAGATCACCGTTGCCCGTCAGGAACAGGCCGCGCTCGCAGCCGCTCACTGA
PROTEIN sequence
Length: 106
EPGEWQDWLVDTSPNQEAIMAESEEYDHRRQALNGAMGVLNPREKRIFEARRLADEPMTLEDLASEFGVSRERVRQIEVRAFEKVQAAVKITVARQEQAALAAAH*