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SCNpilot_cont_750_bf_scaffold_23117_1

Organism: SCNpilot_cont_750_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 15
Location: comp(2..1699)

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 91.0
  • Coverage: 566.0
  • Bit_score: 1020
  • Evalue 2.60e-295
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.0
  • Coverage: 566.0
  • Bit_score: 1020
  • Evalue 1.20e-294
Transcription-repair-coupling factor n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q136Y8_RHOPS similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 566.0
  • Bit_score: 1020
  • Evalue 8.30e-295

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1698
CGCATGGCCAACATGCTCAAGGACCACAAGCTTCTCAATCTCACCAGCGTCAACGCCTGGCGCACGGTGCAGGCGACGCCGCGCAACGAAACCATGTTGGCAGTGGTCGGCATGGAATCCGGTTTTGAGACCGATGCCGTCGCCGTCATCACCGAGCAGGACATCCTTGGCGACCGCTTGGTACGGCCGCGCAAGGCCAGCCGCAAGCTCGACAACTTCATCTCCGAGGTCACCAGCCTCTCGACCGGCGACATCGTCGTGCACGTCGAGCACGGCATCGGCCGCTTTATCGGCTTGCAGACCCTCGACGTCGCCGGTGCGCCGCACGATTGCGTCGAACTTCGCTACGCCAACGAGACGAAACTGTTCCTGCCGGTCGAGAACATCGACCTGCTGTCGCGCTATGGCTCCGATCAAACCAATGTCGAACTCGACAAGCTCGGCGGCTCGGGCTGGCAGGCGCGCAAGGCAAAGCTGAAGAACCGCATCCGCGAGATTGCCGGTGAGTTGATCAAGATCGCGGCCGAGCGGCATCTGCACGAGGCACCCAAGCTCGCGGTAGAGCCGGGCCTCTATGACGAATTCTGCGCGCGTTTCCCTTACGAGGAAACCGAAGACCAACTCACCGCCATCAACGCCGCGCTGCACGATCTCGAAAGCGGCAAGCCGATGGATCGGCTGGTCTGTGGTGACGTCGGCTTCGGCAAAACCGAAGTGGCGCTGCGCGCGACGTTTGCCGTGGCGATGCAGGGCAAGCAGGTGGCGGTGGTGGTGCCGACGACGCTGCTGGCACGCCAGCACGCGAAGAATTTCGCCGAACGGTTTCGCGGCTTCCCGGTGAACGTCGCGCAAGCGTCGCGGCTGGTCTCGTCCAAGGATTTGAGCCAGACCAAGAAGGGCATCGCCGACGGTTCGGTCGATATCGTCGTCGGCACCCACGCGCTGCTCGGCAAGGCGATCAAGTTCAAGGACCTCGGCCTGCTGGTGGTGGACGAGGAGCAACACTTCGGCGTGTCGCACAAGGAACGGCTGAAGCAGCTCCGCGCCGAAATCCATGTGCTGACGCTCAGCGCGACGCCGATCCCGCGCACCTTGCAACTGGCGCTGACCGGCGTGCGCGATCTCTCGATCATCGCGTCGCCTCCGGTGGACCGCCTCGCGGTCCGCACCTTCGTCGCGCCGCACGATCCGCTGATGATCCGCGAGGCGCTGTTGCGCGAGCGTTATCGCGGCGGGCAGGCGTTCTATGTCTGCCCCCGCATTGACGATCTCGCCGAGGTGAAGGATTTCCTCGACAAGCATGTGCCGGAGATGAAGGTCGCCGTGGCGCACGGCCAGATGCCGCCGGCCACCATCGAAGACATCATGTCGGCGTTCTATGACGGCAAGTACGACATCCTGCTGTCGACGACGATCGTGGAATCCGGCCTCGATATCCCGACTGCGAACACGCTGATCGTGCACCGCGCCGATATGTTCGGCCTCGCGCAGCTCTATCAGCTGCGCGGCCGTGTCGGACGTTCGAAGCTGCGCGCCTATGCACTGTTCACGCTGCCGGCGCAGCAGAAGATCACGGCGCAGGCGGAACGCCGCCTCAAGGTGCTGCAATCGCTGGAAACCCTGGGCGCGGGCTTCCAACTGGCCTCGCACGATCTCGACATTCGCGGCGCGGGCAATCTGCTCGGCGAGGAGCAGTCC
PROTEIN sequence
Length: 566
RMANMLKDHKLLNLTSVNAWRTVQATPRNETMLAVVGMESGFETDAVAVITEQDILGDRLVRPRKASRKLDNFISEVTSLSTGDIVVHVEHGIGRFIGLQTLDVAGAPHDCVELRYANETKLFLPVENIDLLSRYGSDQTNVELDKLGGSGWQARKAKLKNRIREIAGELIKIAAERHLHEAPKLAVEPGLYDEFCARFPYEETEDQLTAINAALHDLESGKPMDRLVCGDVGFGKTEVALRATFAVAMQGKQVAVVVPTTLLARQHAKNFAERFRGFPVNVAQASRLVSSKDLSQTKKGIADGSVDIVVGTHALLGKAIKFKDLGLLVVDEEQHFGVSHKERLKQLRAEIHVLTLSATPIPRTLQLALTGVRDLSIIASPPVDRLAVRTFVAPHDPLMIREALLRERYRGGQAFYVCPRIDDLAEVKDFLDKHVPEMKVAVAHGQMPPATIEDIMSAFYDGKYDILLSTTIVESGLDIPTANTLIVHRADMFGLAQLYQLRGRVGRSKLRAYALFTLPAQQKITAQAERRLKVLQSLETLGAGFQLASHDLDIRGAGNLLGEEQS