ggKbase home page

SCNpilot_expt_500_p_scaffold_30239_2

Organism: SCNpilot_expt_500_p_UNK

megabin RP 50 / 55 MC: 48 BSCG 50 / 51 MC: 48 ASCG 27 / 38 MC: 20
Location: comp(444..653)

Top 3 Functional Annotations

Value Algorithm Source
Helicase of the DEAD superfamily n=1 Tax=Pseudozyma antarctica (strain T-34) RepID=M9LR00_PSEA3 similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 61.0
  • Bit_score: 62
  • Evalue 1.50e-07
Dihydrolipoamide branched chain transacylase E2 {ECO:0000313|EMBL:GAK64785.1}; TaxID=84753 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; mitosporic Ustilaginaceae; Pseudozyma.;" source="Candida antarctica (Yeast) (Trichosporon oryzae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 56.0
  • Bit_score: 65
  • Evalue 4.10e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudozyma antarctica → Pseudozyma → Ustilaginales → Ustilaginomycetes → Basidiomycota → Fungi

Sequences

DNA sequence
Length: 210
GTGCGACATTTGGCGCGCAAACATTCGATTGACTTGTCCAATTTGGTGGGTACCGGCCGCGACGGACGAGTGCGCAAAGAAGATTTGTTGAACTTCATTCAGCACGGTGGTGCTGCTCAACCACAACAACAGAAGCAGACTGCGAGTGAACCTACTCCTGCTGTCGGTGAGTGTTGCGGTGGACTTTATAAGCCTTATTTAGATAATTAA
PROTEIN sequence
Length: 70
VRHLARKHSIDLSNLVGTGRDGRVRKEDLLNFIQHGGAAQPQQQKQTASEPTPAVGECCGGLYKPYLDN*