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SCNpilot_expt_500_p_scaffold_57061_1

Organism: SCNpilot_expt_500_p_UNK

megabin RP 50 / 55 MC: 48 BSCG 50 / 51 MC: 48 ASCG 27 / 38 MC: 20
Location: 3..728

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI000319660E similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 242.0
  • Bit_score: 382
  • Evalue 2.90e-103
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS34174.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 243.0
  • Bit_score: 375
  • Evalue 6.40e-101
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 243.0
  • Bit_score: 330
  • Evalue 5.30e-88
  • rbh

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
GCGCTAACGGATGTCGGCGCGCGGTTTCTCGAACGCGCCCGCCGGATTCTTGCCGACATGGAGGAGGCGGAAGCGTCGGCGCAGACGGAACGCACCCAGCCATCGGGCAAGCTGGTGGTGTCCGCACCCCTCATGTTCGGCCGGCTCTATGTCGGCCCGGTCATGTCGGCCTATCTGAAGACTTATCCGCGGGTAAACGGCGAACTGCGGCTCTCGGACCGGATGATCAATCTGGTGGACGAGGGCGTGGATATCGCGGTGCGCATCGGACATCTGGCGGATTCCAGCGTGATGGCGCGCGCGGTCGGCGACATGCGGCGCGTGGTGGTCGCCTCGCCGCGTTATCTGAAAGCGCGCGGCACGCCGCTCAGGCCGTTCGATCTTGCCGGGCATGAAGTCATCCAGTTCATCGGCGGAAATTCGGAGTGGCGCTTCACCGAAAGCGGCCGTGATCTCCGCGTGCCGGTCACGTCACGCTTCTCCACCAACAGCACCGACGCCGCGATCCTGCATGCGGAGCAGGGCGGAGGTCTGGTCAACGTGCTGGCCTATCAGGCCGTGGAAGCGATCAAAGCCAGGCGATTGCGAATCGTGCTGGCGGAATACGAACCGCCGCCACTGCCGATCCATCTCGTCTATCCGACGTCGCGTCTGCTCTCCGCGAAGGTCCGGGCGTTCGTCGATCTGGTGGCGGCGGAAACCGACTGGCATTTCGGGACGAGATAA
PROTEIN sequence
Length: 242
ALTDVGARFLERARRILADMEEAEASAQTERTQPSGKLVVSAPLMFGRLYVGPVMSAYLKTYPRVNGELRLSDRMINLVDEGVDIAVRIGHLADSSVMARAVGDMRRVVVASPRYLKARGTPLRPFDLAGHEVIQFIGGNSEWRFTESGRDLRVPVTSRFSTNSTDAAILHAEQGGGLVNVLAYQAVEAIKARRLRIVLAEYEPPPLPIHLVYPTSRLLSAKVRAFVDLVAAETDWHFGTR*