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SCNpilot_expt_1000_bf_scaffold_568_22

Organism: SCNPILOT_EXPT_1000_BF_Sphingobacteriales_41_5

near complete RP 46 / 55 MC: 2 BSCG 42 / 51 MC: 1 ASCG 9 / 38
Location: comp(23388..23849)

Top 3 Functional Annotations

Value Algorithm Source
PadR family transcriptional regulator n=1 Tax=Niabella aurantiaca RepID=UPI00035CF309 similarity UNIREF
DB: UNIREF100
  • Identity: 80.7
  • Coverage: 109.0
  • Bit_score: 183
  • Evalue 1.20e-43
PadR family transcriptional regulator {ECO:0000313|EMBL:GAL86682.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 107.0
  • Bit_score: 184
  • Evalue 1.30e-43
PadR family transcriptional regulator; K10947 PadR family transcriptional regulator, regulatory protein PadR similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 107.0
  • Bit_score: 180
  • Evalue 5.70e-43

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Taxonomy

Sporocytophaga myxococcoides → Sporocytophaga → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 462
ATGGGAGAACAACAGTTCTGCCCGTTCACCGATGAAAAACTCCGCTTACCGACAAAAATTGCATTAAACAGTACTTTGTATTGCCTAATACTAAATGTCACCAATATCTTTGACCTACAAATCAAACAAATGAATATAGAGAATACACAAAGCCAAATGCGCAAAGGAATACTGGAGTTTTGTATTCTTTCCATAATAAAAAGAGGAGAAGCTTACCCCAGCGATATTATTGAAGAAATGAAAAATGCTGAAATGGATATTCTGGAAGGGACGCTTTACCCACTTTTAACGAGGCTTAAAAATTCAGGTATGCTTACTTACCGTTGGGAGGAAAGTTCTGCCGGCCCGCCACGAAAGTATTTTTCACTCACTAAACAGGGCGAGCTATTCTACAAGGAATTACAGCAAACCTGGGAAGAATTATCAAACGCTGTAAATGCTCTTACTCAAATTACAAAATAG
PROTEIN sequence
Length: 154
MGEQQFCPFTDEKLRLPTKIALNSTLYCLILNVTNIFDLQIKQMNIENTQSQMRKGILEFCILSIIKRGEAYPSDIIEEMKNAEMDILEGTLYPLLTRLKNSGMLTYRWEESSAGPPRKYFSLTKQGELFYKELQQTWEELSNAVNALTQITK*