ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2671_7

Organism: SCNPILOT_EXPT_1000_BF_Sphingobacteriales_41_5

near complete RP 46 / 55 MC: 2 BSCG 42 / 51 MC: 1 ASCG 9 / 38
Location: 9587..10408

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide repeat-containing SusD/RagB family protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K5M6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 61.4
  • Coverage: 277.0
  • Bit_score: 357
  • Evalue 1.10e-95
SusD family protein {ECO:0000313|EMBL:KHJ39419.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 273.0
  • Bit_score: 423
  • Evalue 3.00e-115
tetratricopeptide repeat-containing SusD/RagB family protein similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 277.0
  • Bit_score: 357
  • Evalue 3.50e-96

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter glucosidilyticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 822
ATGTTTGGCCGACTTAATTATGGAGATGTATTAAGTGCGCCACAGGGAATTGGTTGTTGTGATTTTCAAAAACCGAGTCAAAATCTTGCGAATGCTTATAAAACAGGTGTAGATGGTCTTCCCATGTTCAGTACTTTCAATAATGCTGATTTAGACGCAAATGTAAACACGGTCGACCCCAGACTGGATCACACGGTGGCAATGCCCGGCCATATTTGGAAGTATGATCCTAATACGGTTTATCAGGTTAGTTGGAACAGAAGTCCTGATGTGTACGGCACATTCGCTTCACAAAAAGAAAATGTAAAAAGATCAGAATATACACAGCTAGGCCCTTTTTATGCTAATACAAAAAACAAGATTCTTTTAAGGTTAGCTGATGTATTGCTTTGGAAAGCAGAAGCACTGATTGAATTAGGGCGGCATAACGACGCATTGTCTTTAATCAATCAGGTTCGTACAAGAGCAAAAAATAGTACTTCATTATTAAAATTGTCTAATGGAAATTTTGAATCGAATTACAAAATAGAAACTTATCAGCCTGGTGTAAATTGTACCTGGACACAGGATTTTGCAAGGCAAGCTTTGCGCTGGGAAAGAAGGCTGGAATTTGCTATGGAAGGCAACCGCTTTTTTGATTTGGTAAGATGGGGCGTTGCAGATACTTACCTGAATAATTATTTCTCTGTCGAAAAAACAAAGCGAACCTATTTAAAAGATGCAAAGTTTACCAAAAACAGGGATGAGTATTTGCCGATTCCTTACCAGCAGATCCAATTCAGCCATAATCTGTATAAACAAAATCCGGGTTATACGCAATAG
PROTEIN sequence
Length: 274
MFGRLNYGDVLSAPQGIGCCDFQKPSQNLANAYKTGVDGLPMFSTFNNADLDANVNTVDPRLDHTVAMPGHIWKYDPNTVYQVSWNRSPDVYGTFASQKENVKRSEYTQLGPFYANTKNKILLRLADVLLWKAEALIELGRHNDALSLINQVRTRAKNSTSLLKLSNGNFESNYKIETYQPGVNCTWTQDFARQALRWERRLEFAMEGNRFFDLVRWGVADTYLNNYFSVEKTKRTYLKDAKFTKNRDEYLPIPYQQIQFSHNLYKQNPGYTQ*