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SCNpilot_expt_1000_bf_scaffold_6073_3

Organism: SCNPILOT_EXPT_1000_BF_Sphingobacteriales_41_5

near complete RP 46 / 55 MC: 2 BSCG 42 / 51 MC: 1 ASCG 9 / 38
Location: 3461..4531

Top 3 Functional Annotations

Value Algorithm Source
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 352.0
  • Bit_score: 633
  • Evalue 2.50e-178
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 356.0
  • Bit_score: 595
  • Evalue 1.00e-167
thiouridylase n=1 Tax=Niabella aurantiaca RepID=UPI00037083A7 similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 355.0
  • Bit_score: 633
  • Evalue 1.40e-178

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Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1071
ATGAGCGGAGGTATTGATAGTACCGTAGCATCGCTCATGTTGCATGATGAAGGGTATGATGTGGTGGGTATCACCATGAAAACCTGGGATTACACCCACAGCGGTGGTGGCAAAAAGGAAACAGGCTGTTGTAACGTTGATAGTTTTAATGACGCGCGCATGGCTGCCGTTCAACACGGATTTCCGCATTTTATTTTAGATATACGCGATGAATTTGGTGATTTTGTAGTGAATAATTTTGTGGACGAATACCTGGCCGGCCGAACACCAAACCCCTGCGTGCTTTGCAATACTCACATTAAATGGCGCGCTTTGTTAAAAAGAGCCGATGCGCTCAATTGCGACTTCATTGCCACAGGCCATTACGCAAAAATTCGTCAGTTCGATAATGGTAATTATGTCATTAGCAAAGCGGTTGACCATACGAAAGACCAAAGCTACGTGCTTTGGGGATTGGAGCAGGATTTGCTCAGTCGTACACTATTGCCGCTTGGCGAATTTCATAAGACCGAGATCAGGCAGATGGCAGTGGATTACGGCTACCCCGAGCTGGCCAAAAAAAGCGAGAGCTATGAAATTTGTTTCGTGCCGGATAATGATTACCGCAATTTTCTTCGCCGCAAAGTAGAAGGGCTGGATGAAAAAGTAGCCGGCGGGAACTTTATTGATAAATTTGGAAACGTGCTGGGGCAGCACAAAGGCTACCCGTTTTACACGATTGGCCAGCGCAAGGGCCTTGATATTGCGTTTGGGAAACCGGTTTTTGTCACCTTCATCAATCCCGATGATAATACCGTGATGCTGGGCGATGAGGAAGACCTGAATAAAAACGAAATGATGGTGGGCAAACCCAACCTTCAAAAATATGATTCAATAACGCCCGGTATGGAAGCTGTTACAAAGATCAGGTACAAAGACAGCGGTACACTCAGCAATCTTTACCCCGAAGCTGATAAAGTAAAAGTAGCTTTTTATGAAAACGCAAAAGGCATCGCACCTGGGCAAAGCGCTGTGTTTTACGAAGGCGACGACGTGATCGGCGGCGGTATCATTCAGGGCGGAAGAATTTAA
PROTEIN sequence
Length: 357
MSGGIDSTVASLMLHDEGYDVVGITMKTWDYTHSGGGKKETGCCNVDSFNDARMAAVQHGFPHFILDIRDEFGDFVVNNFVDEYLAGRTPNPCVLCNTHIKWRALLKRADALNCDFIATGHYAKIRQFDNGNYVISKAVDHTKDQSYVLWGLEQDLLSRTLLPLGEFHKTEIRQMAVDYGYPELAKKSESYEICFVPDNDYRNFLRRKVEGLDEKVAGGNFIDKFGNVLGQHKGYPFYTIGQRKGLDIAFGKPVFVTFINPDDNTVMLGDEEDLNKNEMMVGKPNLQKYDSITPGMEAVTKIRYKDSGTLSNLYPEADKVKVAFYENAKGIAPGQSAVFYEGDDVIGGGIIQGGRI*