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SCNpilot_expt_1000_bf_scaffold_10317_1

Organism: SCNPILOT_EXPT_1000_BF_Sphingobacteriales_41_5

near complete RP 46 / 55 MC: 2 BSCG 42 / 51 MC: 1 ASCG 9 / 38
Location: comp(72..1883)

Top 3 Functional Annotations

Value Algorithm Source
RagB/SusD domain protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S8K6_PEDSD similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 632.0
  • Bit_score: 577
  • Evalue 1.50e-161
  • rbh
RagB/SusD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 632.0
  • Bit_score: 577
  • Evalue 4.80e-162
  • rbh
RagB/SusD domain protein {ECO:0000313|EMBL:ADY51290.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.9
  • Coverage: 632.0
  • Bit_score: 577
  • Evalue 2.10e-161

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Taxonomy

Pseudopedobacter saltans → Pseudopedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1812
ATGAAAAATATTTCTATTTATCTTTTAGCTTGCATAGTTGTATTCGCATCCTGTAATAAATTTTTGGAAACAAAACCACGTGATGTTTACTCCCCTGAAATTTTTTATGAGGATGAAAAGCAACTGAATGGGGCGCTTACCTCAATTTACAGCGTTTTTGCGAGCGAGCAGCTTTACGCAGGATTCGTGACTTATAATGGCTTTGATGCTGATTTGTCGTATCAACGTAGCCTTAGCGTGTCTTCAATTGGCCCCTCGGCTTATAACGTGTCTGCAACCGAATCAAGGGTGGCAGACTACTGGCGCTTGTGCTATGTTGCAATTGAAAGAGCCAATTTACTGTTGGCCAACATTGACAAACCTGAAATGAATGAAGATGCCAGAAATGTTATAAAAGGTGAGGCATTGTTTTTACGCGGTTATTATTATTTCATGCTGGTACAAAACTTTGGCGGGGTGCCTTTAAAGTTAATACCCACAAAAGATGGTTCAAACACTGTACTGGCTCGTTCTTCGGTGAAAGAAGTTTACACGCAAATACTGGCAGATATGGAAGCTGCAGAGCCGTTGGTGAGATCCATTGCATCTATTGGGAGTGGTGGCCGGGTGAGCAAGTCGGCAGTAAGAGGTATTTTAGCCCGGGTAAACCTTTATATGGCCGGTAAGCCCTTATTTGAAGAAGCAAGATATGCCGAAGCGAAGAAATGGGCCGCAATGGTAATAGATGACGGATACCACGTGTTGAACAATGATTTTTCGCAGGTATTTATCAACTATTCTGCTGATAAATATGATACCAAAGAAAGTATTTGGGAAGTGGAACTTTATGGAAATGCAGTGGGAATGTGGACGGCAATATCCGGGCGTATCGGCGATTATGCAGGGGTGGCTTATACAGATGAGTCAGATATGTTTTCTTATGGACGCATTAGAGCCACGGGCATATTATGGGACAAATTTGATAACTACGATAAGCTATATTCTTACGATCAACGCCGTGATTCGGCTATTGCACCCTATCGATTGGTAGTTGGTGAACCCGCAACGCGGACATACATTACCTCTGTTAGTCATTACACCCGTGACTGTGGCAAATACAAAAGAGAATACGAAGTGGTATTTCCCCGAAGCAAAAACTACAGCCCAATTAACTTTCCGCTGCTACGCTACGCCGATGTATTGTTAATGTATGCCGAAGCCGAGAATGCAATAAACGGGCCTACCCAGGATGCCATTGATAAAGTGAACGATGTAAGAAGAAGAGGCTACGGAAAGTATCTGAACGGCCGCAGTGGAAATGCCCAAAGCGTTGCCACGCTAACATTGGGCGCAGCAGGAACAGGCTATGTGGCAGCCTCGACTAAAGTGGAAATCACAGGAGGCGGAGGCATCGGAGCCACTGCAACGGCAACTGTGTCAAGTGGCAGAATAACAGCCATTACTTTAACGAATCCCGGCGCCAGGTTTACTTCAGTACCCCTCGTTACAATTACNNNNNNNNNNNNNNNNNNNNCCGCCGATGCAGACCTGAAACCCGAAGCCTATACAAGTAAAGAGGTTTTTCTCACCACAATTCAGGATGAAAGAGCGAGAGAACTTTGTTTTGAAATGATTAGAAAATATGATCTCGTAAGGTGGGATATTTTTATGAGGAATATGGAAATGACGAGAAGTGATATAGCGGAAAAGGTGCCTACGTCAACCCAGATTCCCGTGCCCTATGATAACGTTTCGGCAAGGGACGAATTATGGCCCATACCATCCTACGAAATGGGAATGAACCCTGCAATGACACAAAATCCCGGTTGGTAA
PROTEIN sequence
Length: 604
MKNISIYLLACIVVFASCNKFLETKPRDVYSPEIFYEDEKQLNGALTSIYSVFASEQLYAGFVTYNGFDADLSYQRSLSVSSIGPSAYNVSATESRVADYWRLCYVAIERANLLLANIDKPEMNEDARNVIKGEALFLRGYYYFMLVQNFGGVPLKLIPTKDGSNTVLARSSVKEVYTQILADMEAAEPLVRSIASIGSGGRVSKSAVRGILARVNLYMAGKPLFEEARYAEAKKWAAMVIDDGYHVLNNDFSQVFINYSADKYDTKESIWEVELYGNAVGMWTAISGRIGDYAGVAYTDESDMFSYGRIRATGILWDKFDNYDKLYSYDQRRDSAIAPYRLVVGEPATRTYITSVSHYTRDCGKYKREYEVVFPRSKNYSPINFPLLRYADVLLMYAEAENAINGPTQDAIDKVNDVRRRGYGKYLNGRSGNAQSVATLTLGAAGTGYVAASTKVEITGGGGIGATATATVSSGRITAITLTNPGARFTSVPLVTIXXXXXXXXADADLKPEAYTSKEVFLTTIQDERARELCFEMIRKYDLVRWDIFMRNMEMTRSDIAEKVPTSTQIPVPYDNVSARDELWPIPSYEMGMNPAMTQNPGW*