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SCNpilot_cont_500_bf_scaffold_1881_13

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

near complete RP 42 / 55 MC: 2 BSCG 41 / 51 ASCG 12 / 38
Location: 11885..12517

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036D7FEE similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 166.0
  • Bit_score: 185
  • Evalue 5.90e-44
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 163.0
  • Bit_score: 182
  • Evalue 1.60e-43
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABF54304.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.1
  • Coverage: 163.0
  • Bit_score: 182
  • Evalue 7.00e-43

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Taxonomy

Sphingopyxis alaskensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGACGCCCGACCCCAAGATGCCACCGCCGCATGACGCCCACAGCTACGCCGGCGCGGCGGAGGTAACGCCAAACCCATCCGCCTCAGTCCGCGCAATTGAGGCGCTGTATCGAACCGAGCGGCGCACATTGCTGCGCTACCTGGGCCGCCGCGTCCGCGCCGATATCGCCCCGGATCTCGTGCAGGAAGTTTACGCCCGCGCGTTGTGCAGCCGGCAGGTGGATCACCTCGACAATCCGGCGGCGTTTATCAGGCGGATCACCCGCAATCTGTTGATCGACCGGGCGCGCCGCCGCGCCATCCACCCGGCGATCATGGTCGACTTCGACGATCAACATGACCTCGTCGAGCCTGCCGAGCAAACATGGGCGATCGAGGCGGCCGACTTGCTGCGCATCTACGAGCAGACGGTGGCGGCCTTGCCGGACAAGACACGGCGCGTGTTCCTGCTCCACCGTCAGGAGCAGCTCACCTACCAACAGATCGCCGAAGCCAGCGCGATCAGCATCCTCACCGTCAAATATCATATGACGCGCGCGCTGGCGGCGTGCCGGGCCGCGATTGCGGCCAATTGTGCGGGCGCGCCCACCCCACATCCCGCTCGAGCCGGCGCACGTCATGGGCGACATTGA
PROTEIN sequence
Length: 211
MTPDPKMPPPHDAHSYAGAAEVTPNPSASVRAIEALYRTERRTLLRYLGRRVRADIAPDLVQEVYARALCSRQVDHLDNPAAFIRRITRNLLIDRARRRAIHPAIMVDFDDQHDLVEPAEQTWAIEAADLLRIYEQTVAALPDKTRRVFLLHRQEQLTYQQIAEASAISILTVKYHMTRALAACRAAIAANCAGAPTPHPARAGARHGRH*