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SCNpilot_cont_500_bf_scaffold_60_12

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(11788..13041)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein family 1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CJZ5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.3
  • Coverage: 417.0
  • Bit_score: 732
  • Evalue 2.60e-208
ABC-type sugar transport system periplasmic component {ECO:0000313|EMBL:EYR83018.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 417.0
  • Bit_score: 732
  • Evalue 3.60e-208
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 417.0
  • Bit_score: 717
  • Evalue 2.70e-204
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1254
ATGGTGAAGCTAAGACGTCTTCTCATGGGCGCGGCCTTCGCGCTTGCTGCATTTCCGGCGATGGCCGGCGAGCTGACATTCTGGCATGCCTATGCTGGCCAGCAGGACAAGGTCGATTTCATCAATTTCGCGCTGGGTGAATTCGCCAAGAAGCATCCGGACATCAAGCTTGATGTCGTGGCCGCCGAGCAGTCCGCTTATAAGACCAAGCTCAACACGGCGATGGCGTCCGGCAATCCTCCCGACGTGTTCTACACCTTGCCTGGCGGCTTCTTGAACGCCTTCGTCAAGGGCGGACAGATGTATGCGCTTGATCAGGATCTCGCCAAGGACGGCTGGCGCCAGAGCTTCCTCGAAAGCGCCATTGCCCAGACGAGCAAGGATGGTCATACCTACGCCGTGCCTGTCGACGTCGACTCCGTCGTCTTCTGGTACAACAAGGCGCTGTTTGCCGAAAAGGGCTGGACGGTTCCCAAGACCTATGACGAGCTGATGGCTTTGGCCGAAAAGATCAAGGCCGACGGCGAAGTGCCCTTTGCGCTTGGCAACAAGGATTCCTGGCCGGCCACGTTCTGGTTTCAGTATCTGGAAATGCGCCTGAAGGGCTCGGGCGTGGTCGCATCCTTCGTCAATGGCGATGCCAAGGCGACATTCGGTCCCGAAGGCGAAAAGGCTTTCGAAAGGGTCGCAGAGATCGCCAAGAAGCAATATTTTCCGACCGGTTTCAACGGCATGAGCGACCAGGAAGCCAACATGCTGTTCCTGAACGGCCAGGCCGCAATGATGCTGAACGGCACGTGGCAGATCGGCGCCTCCGCCGATGCACCCGAAGGTTTCGAGCTTGCCTCCTTCGCTTTCCCCTCGGTTCAGGGTGGGGCGGGCGATCAATCTGATGTTCTTGCCGGCGTCGCCGCGTCCTTCGGAATATCGCAGAAAGCAGAAGACAAGGCGGATGCGGTGACGCTTTTGAAGTTCCTCACCTCCAAAGAGGTGATGACCAAATATGTCGAGCTGCGCAAGACGATGGTGACCGTCAAGGACGCCACTACGGAAGCCGCGGCCGGTCCGGTGCTCTACGCTATCAGCAACGGCCTGGTCAGCGCGGCCGGCCATCTCGACTCGTTCTACGACACGGCTATGCCGCCGGCTGCGACCAATACCTACTATACATCCTTGCAGGGTGTGCTCGATGGCTCTGTCGCGCCCGCCGATGCCGCCAAGCGCCTCGAAGACGCGCTGAAGACCAGCAAATAA
PROTEIN sequence
Length: 418
MVKLRRLLMGAAFALAAFPAMAGELTFWHAYAGQQDKVDFINFALGEFAKKHPDIKLDVVAAEQSAYKTKLNTAMASGNPPDVFYTLPGGFLNAFVKGGQMYALDQDLAKDGWRQSFLESAIAQTSKDGHTYAVPVDVDSVVFWYNKALFAEKGWTVPKTYDELMALAEKIKADGEVPFALGNKDSWPATFWFQYLEMRLKGSGVVASFVNGDAKATFGPEGEKAFERVAEIAKKQYFPTGFNGMSDQEANMLFLNGQAAMMLNGTWQIGASADAPEGFELASFAFPSVQGGAGDQSDVLAGVAASFGISQKAEDKADAVTLLKFLTSKEVMTKYVELRKTMVTVKDATTEAAAGPVLYAISNGLVSAAGHLDSFYDTAMPPAATNTYYTSLQGVLDGSVAPADAAKRLEDALKTSK*