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SCNpilot_cont_500_bf_scaffold_60_13

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 13144..14043

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, RpiR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EI13_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 284.0
  • Bit_score: 482
  • Evalue 3.30e-133
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EYR83019.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 284.0
  • Bit_score: 482
  • Evalue 4.60e-133
RpiR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 82.0
  • Coverage: 284.0
  • Bit_score: 452
  • Evalue 8.80e-125

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGCTAACTCTCAACCCGACAGCGTCTGCCAGCGAAAGAACCGTCATGACCCTTGACCTGCATGGTCCAGTGAACCCAGCCAGCAGCCGGCTGCGAAGCGTCCTGCCGAAATTGTCGGAGTCTGAGCGGCGCGTTGCGCTTTGGGTCCTGGAGAATATCAACGCCACCATCCGCCATTCGATGTCGGCCATCGCCCAGGCAACCGATGTCAGCGATACGACCGTGTTGCGCATGTGTCGCACGGCCGGTTTCGAAGGTTTTACAGACCTTAAGCTAGCGCTGGCGCAGGAACCGCGCGATATGCGCGATGCGACCGGCAAGGAGCCGGATGCCACCGATCTCCACGCCGCAGTTCGCCTGTTTCGCGCGGTCGCTCAGGCCATCAGCGACACGCAGGGCGTATTGAACGAGGCGACGTTTGCAAAGGCACTCGACCTGATCGCCGGAGCACGACACATTCTGGTCGGCGGCGTCGGCGGCTCCGGCATTGTCGCTCAGGCTTTCTACCAGCGCTGCATCCGTCTTGGATTGCGCTGCGACGCTCCGGTCGACTCGCAACTACAGATCATGCATTCGGCACTCGTCGGCCCGGAAGACCTGGTCGTGGTCATCTCTTATTCCGGCATTACCAGCGACCCGGTTCTCGTTCTGCAGGAAGCCAGGGCCAGGGGTGCCGCGACCCTCTGCATCACCGGCAACAGTGCCTCGCCGCTCGCGCGACTGGCCGATGTCGTTCTCGTCAGCGTCTCTCATGAGCAGGGCAGCGAACCGATGGCGGCGCAGATTGCCCAGATGGCGCTGATCGATGCTCTCTATTCCGCTCTCGTCGCCCGCAATACCGAGCAGGCCCACCTTACCGAAGAGCGCATGGTCAACGCCATACTTCCAAAGTCAATCTAG
PROTEIN sequence
Length: 300
MLTLNPTASASERTVMTLDLHGPVNPASSRLRSVLPKLSESERRVALWVLENINATIRHSMSAIAQATDVSDTTVLRMCRTAGFEGFTDLKLALAQEPRDMRDATGKEPDATDLHAAVRLFRAVAQAISDTQGVLNEATFAKALDLIAGARHILVGGVGGSGIVAQAFYQRCIRLGLRCDAPVDSQLQIMHSALVGPEDLVVVISYSGITSDPVLVLQEARARGAATLCITGNSASPLARLADVVLVSVSHEQGSEPMAAQIAQMALIDALYSALVARNTEQAHLTEERMVNAILPKSI*