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SCNpilot_cont_500_bf_scaffold_278_27

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(29515..29769)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Rhizobium sp. Pop5 RepID=K0VKJ6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 66.0
  • Bit_score: 112
  • Evalue 2.50e-22
LysR family transcriptional regulator {ECO:0000313|EMBL:EJZ19452.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 66.0
  • Bit_score: 112
  • Evalue 3.60e-22
LysR family transcriptional regulator protein similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 64.0
  • Bit_score: 111
  • Evalue 1.80e-22

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Taxonomy

Rhizobium sp. Pop5 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 255
GTGATCAACGCGGCTGTCGCGGCTCGCGGTGTGGCGCTTGTCCGCAAGGCCCTGGTGGCCCAGGAGCTGGAGCTTGGTCGACTTGTCCATCTCATTCCCGACATCCGATGGCCGGTGAAATGGGCCTACTATGTCGTCGCCCCGCAGAAGGCGCTGCGGCGTCACGAGGTCATGTCTTTCCATACCTGGCTGACCGGCATTCGAGCTGTTGAGTTCAACTGCCCGGCTGAAGCGCCAGGTGCAGGCCCCACATGA
PROTEIN sequence
Length: 85
VINAAVAARGVALVRKALVAQELELGRLVHLIPDIRWPVKWAYYVVAPQKALRRHEVMSFHTWLTGIRAVEFNCPAEAPGAGPT*