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SCNpilot_cont_500_bf_scaffold_416_25

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 22950..23549

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer pilin processing protease TraF n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XZP3_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 175.0
  • Bit_score: 210
  • Evalue 1.20e-51
Conjugative transfer signal peptidase TraF {ECO:0000313|EMBL:BAR63399.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 199.0
  • Bit_score: 258
  • Evalue 7.30e-66
traF; conjugative transfer signal peptidase TraF similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 175.0
  • Bit_score: 204
  • Evalue 2.80e-50

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Taxonomy

Bradyrhizobium diazoefficiens → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGACGTCGACCGTCGGGCGCGAAGCTGGATCGCCGGCACAGGGAGTGGCAACCGGAAGGAAAAGGGCTGGGCGGCAACGGCAGGTCGTTGCGGTTCTGGTGGGGGCGAGCATGATGATGGCGGCGGTTGCCGGCATCGCCTGGCTCGGCGGCCTGCGCCTCAATCTGACGCCGAGCGAGCCGCTCGGGCTCTGGCGGATCGCGCCGCTCGATCGGCCGGCCGCTGTCGGCGATCTCGTCTTCATCTGCCCACCGCCCGGGCCGGTTTCCGACTTCGGCCTCGAGCGCGGATATTTCCGGCGCGGGCCGTGTGACGGCGGCTCGGCCCCGCTCATCAAGACGATCGTCGCGCGTTCCGGCGCCGTTGTCGTCATCGGCGCGGGCGTCGAGATCGATGGCATGCCGCTGCCCCGCTCCGGTCTCAGCGTCATCGACGGCGCGGGCCGGTCTCTCTCACCTTGGTCGGGCGTCTTCGTTCCGCCCGGCTTTATCTTCCTTCACGCATCTTTCGCAGGTTCCTATGATTCCCGGTATTTCGGGCCGGTTCCGGAGGCCGGTCTTCTCGGCCTGGCGCGGCCGGTCCTCGTTTTCGATCCCTGA
PROTEIN sequence
Length: 200
MTSTVGREAGSPAQGVATGRKRAGRQRQVVAVLVGASMMMAAVAGIAWLGGLRLNLTPSEPLGLWRIAPLDRPAAVGDLVFICPPPGPVSDFGLERGYFRRGPCDGGSAPLIKTIVARSGAVVVIGAGVEIDGMPLPRSGLSVIDGAGRSLSPWSGVFVPPGFIFLHASFAGSYDSRYFGPVPEAGLLGLARPVLVFDP*