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SCNpilot_cont_500_bf_scaffold_946_5

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(2431..3105)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator TetR family n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5P8_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 220.0
  • Bit_score: 393
  • Evalue 1.50e-106
  • rbh
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 220.0
  • Bit_score: 393
  • Evalue 4.80e-107
  • rbh
Transcriptional regulator TetR family {ECO:0000313|EMBL:ACM40196.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 220.0
  • Bit_score: 393
  • Evalue 2.10e-106

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Taxonomy

Agrobacterium vitis → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
TTGACGGAAGAGAAGAGTGCGGAAGCACGCAAACAGCCTCGGCGCAGACACCCGCGCAGGCCCGATCTTTCACAAACGCGTATCCTTGATGCCGCTGTTGTGGAATTTGCGGCGAACGGGCTGACAGGAACCCGCGTTGAAGCCATCGCCGAGCGGGCCGAGATCAACAAGCGGATGATCTACCAGTACTTCGGCAACAAGGAACTGCTCTATCAGGCCGTCATCGAGAAGGTCTATCGCGATGTCTGGGATGCCGAGGCGGCACTGAACCTTGACCAGCTCCCTCCCCGCGAAGCGCTGATCGCATTGGTGACATTCGTCTGGAACTATTATCTCAAACACCCGGAATTCATCACCATTCTGAATTCCGAAAACCAGTTGAAGGCCGTGCATTTTCGAAAGTCCCGCATTCTGAGGGACGGCGCCGCCAACTCGCGGCCGCTTGTCGATGACATTCTGCGGCGCGGAGAGGCGGACGGCACATTTCGGGTTGGGATCGACCCAATTCAGCTCGGCCTGACAATTACGTCAATTTGCTACTATTATTTCACCAACCATGCGACGAGCTCTATCGTCTATGGCAAGCGCATGATGACACGAGCTGCGCTGGAACAACGTCTTGCGTTCAATATTCAGACAATTCTGGCTATCGTCGCACCCTATCACCATGTTTGA
PROTEIN sequence
Length: 225
LTEEKSAEARKQPRRRHPRRPDLSQTRILDAAVVEFAANGLTGTRVEAIAERAEINKRMIYQYFGNKELLYQAVIEKVYRDVWDAEAALNLDQLPPREALIALVTFVWNYYLKHPEFITILNSENQLKAVHFRKSRILRDGAANSRPLVDDILRRGEADGTFRVGIDPIQLGLTITSICYYYFTNHATSSIVYGKRMMTRAALEQRLAFNIQTILAIVAPYHHV*