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SCNpilot_cont_500_bf_scaffold_946_8

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 5586..6413

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter membrane spanning protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K5P5_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 275.0
  • Bit_score: 499
  • Evalue 1.80e-138
  • rbh
Putative ABC transporter permease protein {ECO:0000313|EMBL:GAJ97088.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 275.0
  • Bit_score: 535
  • Evalue 5.50e-149
ABC transporter permease; K02026 multiple sugar transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 89.5
  • Coverage: 275.0
  • Bit_score: 499
  • Evalue 5.80e-139
  • rbh

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGGCGCGTTTCTCTCTCCGCCAGATCCTGGCACATGCCGTGCTGCTGGGCGGCGCCTTCCTGATGATCTATCCGTTCTTCTGGATGTGGCGGGCTTCTACCCAGGCCCCGGGGCAGATTTTCGGGAGCCTGCATGACGCCCCGCCGATCCTCACTTCTATCGCAGACAATTACGGCCGCGCGCTGTTCGACAGCCCATTGCCGCGCTTCATGCTGAACGGCGTGATCATGACCGGCGGCATCCTGCTGTTCCAGATCCTGACAACGGTCACCTGCGCCTATGCGCTGGCCAAATTCGACTTTCGTGGCCGTCGCCTGATTTTCGCGATCGTGCTCTTGAGCCTTTCCGTTCCGGCGCAGGCAACGGCGCTGCCGATCTTCATCGTGCTCGCAAAATTCGGGCTTCTCGACACCTATACCGGTGTCGTCATCCCCTATCTGACCTCCGGCTTCGCGATCTTCCTGTTCCACCAGTTCATCCGCTCATTCCCCGACGAGATCCTGCTGGCGGCGCGTCTCGACGGCATGAGCGAGGTGGAGATCGTCATCCGCATCATCCTGCCGGCAATGACCCCTGCCATTGCCGCCTTCTCGATCTTTTCGATCACCTTTCATTGGAACGATCTCTACTGGCCGATGATCGTGATCAGATCCATCGATCTGGCGCCGCCGACCCTCGGCCTCCTGTTCTTCCGGGGCCAGGAAGGCGGCGACAGTTTCGGGCCTTTGATGGCCTGCGCAACGCTTGTCACCGCACCGCTGATCCTGCTGTTCCTCGCCGCCCAGCGCAGGTTCGTGCAGGGCGTGACGATGACCGGCGTCAAATAA
PROTEIN sequence
Length: 276
MARFSLRQILAHAVLLGGAFLMIYPFFWMWRASTQAPGQIFGSLHDAPPILTSIADNYGRALFDSPLPRFMLNGVIMTGGILLFQILTTVTCAYALAKFDFRGRRLIFAIVLLSLSVPAQATALPIFIVLAKFGLLDTYTGVVIPYLTSGFAIFLFHQFIRSFPDEILLAARLDGMSEVEIVIRIILPAMTPAIAAFSIFSITFHWNDLYWPMIVIRSIDLAPPTLGLLFFRGQEGGDSFGPLMACATLVTAPLILLFLAAQRRFVQGVTMTGVK*