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SCNpilot_cont_500_bf_scaffold_946_18

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 16466..17599

Top 3 Functional Annotations

Value Algorithm Source
Putative RND efflux transporter, MFP subunit n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LR42_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 360.0
  • Bit_score: 512
  • Evalue 2.90e-142
  • rbh
Multidrug resistance protein MdtA {ECO:0000313|EMBL:GAK72116.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.0
  • Coverage: 369.0
  • Bit_score: 527
  • Evalue 1.60e-146
putative RND efflux transporter, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 360.0
  • Bit_score: 512
  • Evalue 9.00e-143
  • rbh

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1134
GTGAAGCGAAACTTGTCGATTCTGTCGACATTCTCGTTCATCTCCGTCAGTGGGTTAATGGCTCCCCTCCAGGCCGCGGAGGAGCCGCCCCCAATACCCGTCACAGCAGTCACCGCGCAAACGGCAACAATCCATCGTGTGATAAACGGGATCGGAACTGTATCGCCCCTGCAATCGGTCACCGTGCGATCGCGCATCGACGGCCAGGTCGTCGAAATACCTTTCACGGAAGGCCAGATCGTCGCGAAGGGCAGCGTGCTTTTAAAGCTCGATGATCGTGAACTCCTATCCAATCTGGTGTCGGCGAAGGCAAAGAAGGCCCAGGACGAAGCGCAGTTGAAAAATGCCAAGACGGATGCCGAACGATATGCCACGCTTGCCGAGAAAGGTGTGGCCTCCACGTCGGTTCTGGAGCAGAAGAACGCCTCCAGCCAACAATATGTCGCAGCCGTCCAATATGACGACGCCATGATCAAGAATGCTGAAACGCAGCTCAGCTTTGCGACCGTCACTGCACCCTTTACCGGCCGAACCGGCTTCAAGCAAGTCGATGTCGGCAGCGTCGTCAGTGCGAGCTCAACGAACGGCATTGTAACCATTACTCAGATGGACCCGATAGGCGTTTCCTTCGTGGCTCCCGGTGGCAGGTTCGGCGAAATCCGCGACGCCATGCAAAATGGGATCGCCGAGGTTGAGCTATCAACGACCGATGGCACACGCAATTTGACCGCGGGCAAACTGACAATCATGGATAATGCCGTCGATGCATCCAACGGCTCCATTCATCTGCGAGCCACCTTCGACAACAAGAACGGCATTCTTTGGCCTGGCCTGCCTGTTGCGACACGACTGACCGTTGAGATCCGCAAGGGTATCGTGGTGCCAGACAAGGCGCTGGCTCGTGGGCGTGACGGTCTTTATGCCTACGTCGTGCAGGCTGATGGAAAGGTGGTGAAGAGGAGCGTCAAAACAGCATTTGTAACCGATGCGATGGCCTTGGTCAGCGAGGGTATCAATGATGGCGACCACGTCGTTATGGATGGGCAATCGCGGATCGGTGACGGAGTGAAAGTCGTGGTTACGCCCTGGAACGGATCGCCCACTGGCGAGCTTTCGGGAGGAGTTTCCCAATGA
PROTEIN sequence
Length: 378
VKRNLSILSTFSFISVSGLMAPLQAAEEPPPIPVTAVTAQTATIHRVINGIGTVSPLQSVTVRSRIDGQVVEIPFTEGQIVAKGSVLLKLDDRELLSNLVSAKAKKAQDEAQLKNAKTDAERYATLAEKGVASTSVLEQKNASSQQYVAAVQYDDAMIKNAETQLSFATVTAPFTGRTGFKQVDVGSVVSASSTNGIVTITQMDPIGVSFVAPGGRFGEIRDAMQNGIAEVELSTTDGTRNLTAGKLTIMDNAVDASNGSIHLRATFDNKNGILWPGLPVATRLTVEIRKGIVVPDKALARGRDGLYAYVVQADGKVVKRSVKTAFVTDAMALVSEGINDGDHVVMDGQSRIGDGVKVVVTPWNGSPTGELSGGVSQ*