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SCNpilot_cont_500_bf_scaffold_33

Search features with annotation key words

Displaying items 61-90 of 826 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_33_60
Arthrobacter sp. 11W110_air, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(68390..69133)
DNA (744bp) protein (248aa)
LuxR family transcriptional regulator n=1 Tax=Arthrobacter sp. AK-YN10 RepID=U1YVS7_9MICC
Transcriptional regulatory protein LiaR {ECO:0000313|EMBL:CEA08486.1}; TaxID=1461584 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. 11W110_air.;"
response regulator responding to cell wall stress/antimicrobial peptides
SCNpilot_cont_500_bf_scaffold_33_61
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(69130..70356)
DNA (1227bp) protein (409aa)
histidine kinase n=1 Tax=Arthrobacter sp. 162MFSha1.1 RepID=UPI0003758DB7 rbh
Histidine kinase {ECO:0000313|EMBL:KIC66113.1}; TaxID=361575 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans.;"
histidine kinase rbh
SCNpilot_cont_500_bf_scaffold_33_62
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

70523..70912
DNA (390bp) protein (130aa)
MazG nucleotide pyrophosphohydrolase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZW1_CELFA
MazG nucleotide pyrophosphohydrolase
MazG nucleotide pyrophosphohydrolase {ECO:0000313|EMBL:AEE47277.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_500_bf_scaffold_33_63
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

70953..71534
DNA (582bp) protein (194aa)
deaminase n=1 Tax=Longispora albida RepID=UPI00037FFBE5
Dihydrofolate reductase {ECO:0000313|EMBL:AHY48096.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
bifunctional deaminase-reductase-like protein
SCNpilot_cont_500_bf_scaffold_33_64
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

71544..72161
DNA (618bp) protein (206aa)
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2S5_CELGA rbh
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein rbh
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:AEI10642.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_500_bf_scaffold_33_65
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

72165..72710
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H4K5_CELFA
hypothetical protein; K06966
Putative uncharacterized protein {ECO:0000313|EMBL:AEE47800.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_500_bf_scaffold_33_66
unknown

Not on your lists

72792..73217
DNA (426bp) protein (142aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_33_67
Mobilicoccus pelagius, Mobilicoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(73233..74039)
DNA (807bp) protein (269aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7); K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] rbh
Phosphomethylpyrimidine kinase n=1 Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5UUF2_9MICO rbh
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:GAB49360.1}; TaxID=1089455 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Mobilicoccus.;" source="Mobilicoccus pelagius NBRC 104925.;"
SCNpilot_cont_500_bf_scaffold_33_68
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(74036..74875)
DNA (840bp) protein (280aa)
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain
Thiamine-phosphate synthase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XC59_NAKMY
SCNpilot_cont_500_bf_scaffold_33_69
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(74875..75681)
DNA (807bp) protein (269aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
hydroxyethylthiazole kinase (EC:2.7.1.50); K00878 hydroxyethylthiazole kinase [EC:2.7.1.50] rbh
Hydroxyethylthiazole kinase n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6W8L4_9MICO rbh
SCNpilot_cont_500_bf_scaffold_33_70
Dermacoccus sp. Ellin185, Dermacoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(75678..77090)
DNA (1413bp) protein (471aa)
allantoin permease n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002378FC5 rbh
Putative hydroxymethylpyrimidine transporter CytX {ECO:0000313|EMBL:EFP58226.1}; TaxID=188626 species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Dermacoccus.;" source="Dermacoccus sp. Ellin185.;"
permease for cytosine/purines uracil thiamine allantoin rbh
SCNpilot_cont_500_bf_scaffold_33_71
unknown

Not on your lists

77374..77628
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_33_72
Streptomyces ghanaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(77671..78552)
DNA (882bp) protein (294aa)
Oxidoreductase n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=D5ZUS4_9ACTO rbh
Oxidoreductase {ECO:0000313|EMBL:EFE68752.2}; TaxID=566461 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ghanaensis ATCC 14672.;"
oxidoreductase rbh
SCNpilot_cont_500_bf_scaffold_33_73
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

78667..79104
DNA (438bp) protein (146aa)
HxlR family transcriptional regulator n=1 Tax=Actinoplanes globisporus RepID=UPI00038027DB
putative HxlR-family transcriptional regulator
Putative HxlR-family transcriptional regulator {ECO:0000313|EMBL:BAL88075.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
SCNpilot_cont_500_bf_scaffold_33_74
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

79164..79874
DNA (711bp) protein (237aa)
Uracil-DNA glycosylase superfamily n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UBV6_CELFN rbh
uracil-DNA glycosylase rbh
Uracil-DNA glycosylase superfamily {ECO:0000313|EMBL:ADG76115.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_500_bf_scaffold_33_75
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

79871..80320
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JST0_ARTS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK02100.1}; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
SCNpilot_cont_500_bf_scaffold_33_76
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(80346..80906)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000379BC24
DNA-binding protein {ECO:0000313|EMBL:ETK37554.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
XRE family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_33_77
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

80975..81751
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNS335 RepID=UPI00036E559A
Branched-chain amino acid permease {ECO:0000313|EMBL:AKH82258.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
putative branched-chain amino acid permease (azaleucine resistance)
SCNpilot_cont_500_bf_scaffold_33_78
Streptomycetaceae bacterium MP113-05, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

81748..82071
DNA (324bp) protein (108aa)
Branched-chain amino acid transporter n=1 Tax=Streptomycetaceae bacterium MP113-05 RepID=V6KBN7_9ACTO
Branched-chain amino acid transporter {ECO:0000313|EMBL:EST29517.1}; TaxID=1380770 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae.;" source="Streptomycetaceae bacterium MP113-05.;"
Branched-chain amino acid transport protein (AzlD)
SCNpilot_cont_500_bf_scaffold_33_79
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

82143..85832
DNA (3690bp) protein (1230aa)
RecB family nuclease, putative n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UBW2_CELFN rbh
recombinase B; K06860 uncharacterized protein rbh
RecB family nuclease, putative {ECO:0000313|EMBL:ADG76121.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
SCNpilot_cont_500_bf_scaffold_33_80
Kytococcus sedentarius, Kytococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(85860..86501)
DNA (642bp) protein (214aa)
Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED n=1 Tax=Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541) RepID=C7NHR1_KYTSD
haloacid dehalogenase superfamily protein
Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED {ECO:0000313|EMBL:ACV06418.1}; TaxID=478801 species="Bacteria; Actinobacteria; Micrococcales; Dermacoccaceae; Kytococcus.;" source="Kytococcus sedentarius (strain ATCC 14392 / DSM 20547 / CCM 314 / 541); (Micrococcus sedentarius).;"
SCNpilot_cont_500_bf_scaffold_33_81
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(86618..87661)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Rhodococcus rhodnii LMG 5362 RepID=R7WGT3_9NOCA rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:KGM13744.1}; TaxID=1386082 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas bogoriensis 69B4 = DSM 16987.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_33_82
Bifidobacterium boum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

87898..89430
DNA (1533bp) protein (511aa)
Aminotransferase {ECO:0000313|EMBL:KFI46372.1}; EC=4.2.3.2 {ECO:0000313|EMBL:KFI46372.1};; TaxID=78343 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium boum.;"
Aminotransferase n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RHJ3_9BIFI rbh
aminotransferase rbh
SCNpilot_cont_500_bf_scaffold_33_83
Gordonia soli, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

89566..91182
DNA (1617bp) protein (539aa)
Ethanolamine permease n=1 Tax=Gordonia soli NBRC 108243 RepID=M0QMH7_9ACTO rbh
Ethanolamine permease {ECO:0000313|EMBL:GAC69486.1}; TaxID=1223545 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia soli NBRC 108243.;"
amino acid permease-associated protein rbh
SCNpilot_cont_500_bf_scaffold_33_84
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

91507..93183
DNA (1677bp) protein (559aa)
HNH endonuclease n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BGH7_SANKS
HNH endonuclease
HNH endonuclease {ECO:0000313|EMBL:ACZ21554.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
SCNpilot_cont_500_bf_scaffold_33_85
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

93461..94678
DNA (1218bp) protein (406aa)
Putative dehydrogenase {ECO:0000313|EMBL:CCH79763.1}; EC=1.-.-.- {ECO:0000313|EMBL:CCH79763.1};; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
glutathione-independent formaldehyde dehydrogenase (EC:1.2.1.46); K00148 glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46] rbh
Glutathione-independent formaldehyde dehydrogenase n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SBQ8_INTC7 rbh
SCNpilot_cont_500_bf_scaffold_33_86
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(94773..96149)
DNA (1377bp) protein (459aa)
Major facilitator superfamily MFS_1 n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H4K9_CELFA rbh
DSBA oxidoreductase {ECO:0000313|EMBL:KGM08566.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
major facilitator superfamily protein rbh
SCNpilot_cont_500_bf_scaffold_33_87
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

96433..97779
DNA (1347bp) protein (449aa)
Chloride channel protein EriC n=1 Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RUE2_MYCRN
Chloride channel protein EriC {ECO:0000313|EMBL:CDO06674.1}; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
chloride channel protein EriC
SCNpilot_cont_500_bf_scaffold_33_88
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(97811..99808)
DNA (1998bp) protein (666aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003679D8D
NERD domain-containing protein
SCNpilot_cont_500_bf_scaffold_33_89
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(100351..101166)
DNA (816bp) protein (272aa)
putative polar amino acid ABC transporter ATP-binding protein; K10010 cystine transport system ATP-binding protein [EC:3.6.3.-] rbh
hypothetical protein n=1 Tax=Cellulomonas sp. JC225 RepID=UPI0002F72822 rbh
Glutamine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM17855.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
Displaying items 61-90 of 826 in total

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