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SCNpilot_cont_500_bf_scaffold_146_163

Organism: SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: 178110..178742

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H1F4_CELFA similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 209.0
  • Bit_score: 329
  • Evalue 3.30e-87
  • rbh
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 209.0
  • Bit_score: 329
  • Evalue 1.00e-87
  • rbh
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AEE45125.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 209.0
  • Bit_score: 329
  • Evalue 4.60e-87

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Taxonomy

Cellulomonas fimi → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGATGAGTGACGAGGTGGTGGGACCGGTCGAGGCCGGGCTCCGCGACCAGGAGCAAGGGCTCGCGCTGCGCGCGGCGCACGCCGTGCTGGCCTATCGCGCCGGTGACCGTGCCCCCCTCGCCGAGCTCGTCGAGGTGATGACACCCCTGCTGTGGCACACGGTGCGGGCGCAGGGTGCGGATCCCGAGCAGGCTCAGGACGTCGTCCAGAACGTCTGGCTCACGCTGGTGCGCGACATCGAGACGATCCGCGACCCCCGCGCCACGCTGCAGTGGATGCTCGTCACCGCGCGCCGGGCGGCATGGCGGACGGTGCGCCGCAGTCGCGACGAGCTGGTGCGCCAGCAGCAGGACGAGACGGTGACGGACTGGCTCGCCGCCCCCCTGGACCAGCTGCCCGACGTCGTCGCCGTGCGCGACGAGCGCGACCGGGCGCTGTGGCGGCACGTGCGGGAGCTGCCCGAGCGCTGCCGGCAGCTGCTCGGGCTGGTGGCGACGGTCGACCGACCCGACTACGCCGTCGTGTCGCGCTCCCTCGGGATGCCGGTCGGGAGCATCGGGCCGACGCGCGGCCGCTGCCTGGCCAAGCTCCGCCAGGCACTCACCTCCGATCCCACGTGGAGCCTGGTGTGA
PROTEIN sequence
Length: 211
MMSDEVVGPVEAGLRDQEQGLALRAAHAVLAYRAGDRAPLAELVEVMTPLLWHTVRAQGADPEQAQDVVQNVWLTLVRDIETIRDPRATLQWMLVTARRAAWRTVRRSRDELVRQQQDETVTDWLAAPLDQLPDVVAVRDERDRALWRHVRELPERCRQLLGLVATVDRPDYAVVSRSLGMPVGSIGPTRGRCLAKLRQALTSDPTWSLV*