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SCNpilot_cont_500_bf_scaffold_27_16

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(19831..21216)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, fis family transcriptional regulator n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IPN9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 461.0
  • Bit_score: 738
  • Evalue 5.10e-210
  • rbh
ATPase AAA {ECO:0000313|EMBL:KHK91513.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 460.0
  • Bit_score: 746
  • Evalue 2.60e-212
two component, sigma-54 specific, transcriptional regulator, Fis family; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 461.0
  • Bit_score: 738
  • Evalue 1.60e-210
  • rbh

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Taxonomy

Novosphingobium malaysiense → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1386
ATGGCTGTCGATATCCTGATCGTTGATGATGAAAAGGACATCCGCGAACTGGTGGCGGGTGTGCTGTCGGACGAGGGCTATGAATGCCGGACCGCCGGCGACAGCCGCGCCGCGCTGGACGAGGTGGACCGGCGGCGGCCCTCGTTGGTGCTGCTCGATGTGTGGCTGCACGGCAGCCCGATGGACGGGCTGGAGGTGCTGGACGCGATCAAGACGCGTGAGCCTGACCTGCCGGTCATCATCTTTTCGGGCCATGGCAATATCGACACGGCGGTGGCCGCGATCGGGCGCGGGGCGATGGACTTCATCGAAAAACCCTTTGAGACCGAGCGCCTGCTGCATCTGGTCGAACGCGCCACGGAAACGGAGCGGTTGCGGCGGGAAAACGCGCGGCTGAAACTGGATACGGCGCAGGGGACGGAGTTTCACGGTTCATCCAGCGCAATCAACCATGTACGCGCCACACTTAAACGCGTTGCCAATACCGGCAGCCGCCTGCTGATCTCCGGCCCATCGGGCGTGGGCAAGGAAGTTGCAGCGCGCCTGCTCCATTCGTGGAGCGGGCGGGCAGAAAAGCCTTTCGTCAGCGTCAATTCGGCCCGGATCACGCCTGAACGTTTCGAGGAGGAGCTGTTTGGCGAGGAGGCCAATGGCAAGTTGGTGCGCGCAGGTCTGCTCGAACTGGCCGATGGGGGCACGCTCTATCTGGACGAAGTGGGCGATATGCCGCTGTCGACCCAGGCGCGCATCCTGCGGGTTCTGACCGAGCAGGCCTTTGTCCGCGTGGGCGGCAATCGCCAGATCCGCGTTGATGTGCGTGTGGTGTCCTCGACCAGCCGCAATCTGGAAAAGGAAATCATCGAAAAGACCTTCCGCGAGGATCTGTTCTATCGGCTCAACGTGGTGCCGGTGGCGGTGCCGCCTCTGGCCGAGCGGCGCGAGGATATTCCCGTGCTGGTCCAGCATTTCTTTGCCCGCTATGCCAATGATCAGGGCATGCCCCCGCCCGATATCAGCATCGAGGCGATGGCCGCGATGCAGGCCTATGAATGGCCGGGCAATGTGCGCCAGTTGCGCAATGTGGTGGAGCGCACGGTGATTCTGGCCCCGCGCGAGAGGCTGGGGCGGATCGAGGTCGATATGCTGCCTGCCGAAATCAACAGCGGGCGTCTGGCCGGAGATTCCGGCATGTCCTCCTTGATGGGCGTGCCCCTGCGCGAGGCGCGGGAAAACTTTGAGCGGGAATATCTGCGGGTTCAGATCCGCCGCTTTTCCGGCAATATTTCAAAGACCGCCGCCTTTATCGGGATGGAGCGTTCGGCCCTGCATCGCAAGCTCAAGCTGCTGGGCATGGGCGACAAGCGGGACGATGACGAGGAGGATTGA
PROTEIN sequence
Length: 462
MAVDILIVDDEKDIRELVAGVLSDEGYECRTAGDSRAALDEVDRRRPSLVLLDVWLHGSPMDGLEVLDAIKTREPDLPVIIFSGHGNIDTAVAAIGRGAMDFIEKPFETERLLHLVERATETERLRRENARLKLDTAQGTEFHGSSSAINHVRATLKRVANTGSRLLISGPSGVGKEVAARLLHSWSGRAEKPFVSVNSARITPERFEEELFGEEANGKLVRAGLLELADGGTLYLDEVGDMPLSTQARILRVLTEQAFVRVGGNRQIRVDVRVVSSTSRNLEKEIIEKTFREDLFYRLNVVPVAVPPLAERREDIPVLVQHFFARYANDQGMPPPDISIEAMAAMQAYEWPGNVRQLRNVVERTVILAPRERLGRIEVDMLPAEINSGRLAGDSGMSSLMGVPLREARENFEREYLRVQIRRFSGNISKTAAFIGMERSALHRKLKLLGMGDKRDDDEED*