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SCNpilot_cont_500_bf_scaffold_773_29

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 28426..30840

Top 3 Functional Annotations

Value Algorithm Source
ligand-gated channel protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B699DB similarity UNIREF
DB: UNIREF100
  • Identity: 79.1
  • Coverage: 796.0
  • Bit_score: 1294
  • Evalue 0.0
  • rbh
DNA, contig: SP661 {ECO:0000313|EMBL:GAN15574.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.1
  • Coverage: 784.0
  • Bit_score: 1038
  • Evalue 0.0
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 811.0
  • Bit_score: 549
  • Evalue 1.40e-153

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2415
ATGACTTCGACGCAGCGCGCGCAACGTGTCACACACTTGCGCAACGATCTGCTGGCGGGGCTCGTCTTGCCTGCCTTGCTGGTGGCATCACCTGCGCTGGCGCAGGATGGGGGAAGCGCCACCGCCGCGCGCAATGCCGATATGCCGGCTCCGGGGGAGATTGTCGTCACCGCCACGCGCAAGGCGCAATCGCTCAGCCGCGTTCCGGCCAGCGTGGTGGCCAAAAGCAGCGTGGAACTTGATACGCAGGGCGTGCGCTCGATCGCCGATATCGCGCAGGTCACGCCGGGCATCACCTTTGGTCAGTCCGCCGTCCTTTACGGCACAGGCCAGACCTCGATTGCGATCCGCGGCATCGACTCCGCTTCGGGGATTCCCACCACCGGCGTCTATATCGACGATACGCCCGTACAGACCCGCGTCGGGGTCAGTCCGTCGCTGAGCAATCCCTATCCGCAGGTGTTCGATCTTGATCGCGTCGAAGTGCTGCGCGGGCCGCAGGGCACGCTGTTCGGCAGCGGCTCGGTGGGCGGCGCGGTGCGCTTCATCATGCCCAAGCCCAGCTTTGACAAGATTTCCATGTATGACCGCGCCGAAGTGGGCAGCACGCATAATGGCGCGGCCAGCTATGAGGCCGGGGTGGCGCTTGGCGCGCCGATCGTTACCGACAAGATCGGCTTTCGCGTCAGCGCATGGACCCGCCATGACGGCGGCTATATCGACCGTCTGGATCGGACCACCAAACAGGTTACGCAAAAGGACATCAACAGTTCCGATACAGTATCGCTGCGTCTTGCGCTGGGCGCACGGGCCACGGATCGGCTGACGATCACCCCGTCGATCTTCTATCAGTATCAGAACATTGCCGATGGTTCGCGCTTTGAACTGGCGACCTCCGATCTGGCCCATGCCGACCAACGGCTGAGCCTGAACACGAAGCCGGAGCGGCACCGCGACGATTTCTATCTGCCCGCACTCAAGGTCGAGCTTGATCTGGGCCGCGCCACGCTGGTTTCCGATACGTCCTATTTCCACCGCACCACGCGGACGCAGAGCGATGACGCCACGCTTAGCCTGACGCTGTTCGGCGGCGTGGTCGGCTCCATCCCCAGCCAGTTCCAGAACTATGCGCCGGGCACGCAAAGCCACACGATCCAGAAATCCTTCACGCAGGAACTGCGCCTGCAGAACAACAATGCCAATGACCGCTTCAACTGGATCGTCGGCCTGTTCTATCAGCGCTCCTTTGTGCAGGACCAATATGCCGGCAGCGATCCGCAGTTGCTTGATGTCGTCAACTATGGCCAGGCCCAGAACGGCAATCCGCCCTACTCCTCGCTGATGGATGCCTATGGGGTCGATCTCTATCAGGGCCAGTTCAGCGTGTTTCAGCGCAACACCCACCGCGATCAGCAAATGGCCGCTTATGCGCAGGCTGACTATGAAGTGGTGCCCCGGCTGAAGCTGACCCTTGGCGGGCGCTACACGATTGCCAAATATCAGTTTGAAGGCTTCACCGCCGGGCCGCTCTACACCACCCCCGGCCGTACCGACAGTCTGGGCATCACCAGCCGCACTTTCACCCCGCGCCTTGGCGTGACGTTTCAGGCCGACCAGCGCAACATGTTCTATGTCAGCGCGGCCAAGGGGGTGCGCGGCCCCGGCGTATCGCCGCCGGTGGGCCTGACATGCAGCAGCGATGCGGCGGCCATCGGATTTGATCCGCTCGCCTCGCTCAACGTCAAGCCGGACTCGATCTGGAGCTATGAGGCGGGCAGCAAGAACCGTCTGTTTGGCGGCAAGCTGGCGATGGATGCCTCGGTCTATCACATCGACTGGAACAATGTGCAGACGCTCTTTGCGCTGCCGACCTGTTCCATCTATGCCGCGCTCAATCTTGGCTCGGCCAAGGTTGACGGGTTCGATCTTGCAGTCACTGTGCGCCCCGTGCCCTCGCTGACGCTTGGCGCTTCGGTGGCCTATACCAATGCGCGTTATACCACCTCTATTCCGGGACCCAACGGCAGCACCATCCGCAAGGCCGGAGAGCCTTTCGCTGTGGCTCCCTGGTCATTCCAGTTGAATGGTGAATTCACCCATCCCGTTGGCGGCATCGAGGGCTATGCCCGCGCCGATTTCTCTTACAACAGCCACAACAGCACACCGGTCAACGTCAATTCGCCGCTGGTCGACCCGGCCTTGCCGCGTCCGCCCGCAACCTCGCAACTCGATCTGCGCGTCGGTGGCCGGATCAAGGCAAACTGGGCCGATCTTGATCTCAGCCTCTATGCCAATAACGTGACCGACAGCCAGCCTGTGCTGGCGCTTTATCACGATTCGCCGATTTCGACCTGGTATCGTGCGGGCAGTTTCCGCCCCCGCACGATCGGTCTCACCCTGACGGCGCGCAAATGA
PROTEIN sequence
Length: 805
MTSTQRAQRVTHLRNDLLAGLVLPALLVASPALAQDGGSATAARNADMPAPGEIVVTATRKAQSLSRVPASVVAKSSVELDTQGVRSIADIAQVTPGITFGQSAVLYGTGQTSIAIRGIDSASGIPTTGVYIDDTPVQTRVGVSPSLSNPYPQVFDLDRVEVLRGPQGTLFGSGSVGGAVRFIMPKPSFDKISMYDRAEVGSTHNGAASYEAGVALGAPIVTDKIGFRVSAWTRHDGGYIDRLDRTTKQVTQKDINSSDTVSLRLALGARATDRLTITPSIFYQYQNIADGSRFELATSDLAHADQRLSLNTKPERHRDDFYLPALKVELDLGRATLVSDTSYFHRTTRTQSDDATLSLTLFGGVVGSIPSQFQNYAPGTQSHTIQKSFTQELRLQNNNANDRFNWIVGLFYQRSFVQDQYAGSDPQLLDVVNYGQAQNGNPPYSSLMDAYGVDLYQGQFSVFQRNTHRDQQMAAYAQADYEVVPRLKLTLGGRYTIAKYQFEGFTAGPLYTTPGRTDSLGITSRTFTPRLGVTFQADQRNMFYVSAAKGVRGPGVSPPVGLTCSSDAAAIGFDPLASLNVKPDSIWSYEAGSKNRLFGGKLAMDASVYHIDWNNVQTLFALPTCSIYAALNLGSAKVDGFDLAVTVRPVPSLTLGASVAYTNARYTTSIPGPNGSTIRKAGEPFAVAPWSFQLNGEFTHPVGGIEGYARADFSYNSHNSTPVNVNSPLVDPALPRPPATSQLDLRVGGRIKANWADLDLSLYANNVTDSQPVLALYHDSPISTWYRAGSFRPRTIGLTLTARK*